Rhizorhabdus wittichii RW1: Swit_5129
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Entry
Swit_5129 CDS
T00538
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
swi
Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swi02000
]
Swit_5129
Transporters [BR:
swi02000
]
Other transporters
Pores ion channels [TC:
1
]
Swit_5129
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ABQ71240
UniProt:
A0A9J9LGL4
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Position
pSWIT01:complement(15110..17425)
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AA seq
771 aa
AA seq
DB search
MGFRHSIHVSALASVATLALATAAFSAPAMAQEAAADDSGAIIVTARRREESLIDVPISV
TAISGDALQKSGAIDITDISQSVPNVTLETSRGTNSTLTAFIRGVGQQDPVAGFEAGVGL
YLDDVYLNRPQAAVLDIYDVERVEVLRGPQGTLYGRNTIGGAVKYVTKRLTTDPTLSVRG
TYGSYDQADGVITASTPVGDGTLKFGGALARLSRGGFGDNLTTGRENYNKDVWAGRLSAQ
ADGEGFFVRLTGDYTKDKSEPRGGHRLIPGLFSGAPVLNDVYDTRAGLLDPKQDVEAYGV
SLFGEFEVTDGFTLRSITAWRKDNSATPIDFDSLAAVDGDVPAFHNNRQLSQEIQLLVST
GNLNGLIGGYFLDAKARTVFDARLPGGVTPLTFGDVGTETFAIFGDFTYDFTPQLSLSVG
GRYTWDERTSQILRRTYLGGGSPFFGGTGTLFATTSDFRGSQTFKEFTPRASLSFKPTQD
QTLYASYAKGFKGGGFDPRGQSTACRTPTGGTCTPQQVFDFLSFDPETVETYEVGYKASY
GRRLTIALSGFYSDYTDVQVPGSIGTTVNGQQTFVGITTNAGKARIQGIEFEGNLLVAKD
IGAPGSRLNLNWAGGYIDAKYKQFIDSRGIDVANRRAFQNTPKWTASGTLAYSIPAFGGD
ISTSTTVSYRSKSQQFELRTPGLDQAGYALWDASIVWTSEGGRYSLGVHGRNLTDKQYIV
SGNNFLSQNPDTGNFNRNAAGALIPTLGREGVLTAYYGNPRQVFVSAGVKF
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggggttccgtcattccattcatgtttctgcgctcgcgtccgttgccactctggctctg
gcgactgctgccttttccgccccggcgatggcgcaggaagcggcggccgacgacagcggc
gcgatcatcgtcacggcccgtcggcgcgaagaaagccttatcgatgttccgatttcggtg
acggcgatcagtggcgacgcccttcagaaatccggcgcgatcgacatcaccgacatcagc
cagtcggtccccaacgtcaccctggaaacctcgcgcggcaccaactcgacgctgacggcg
ttcattcgcggcgtgggccagcaggatccggtcgccggtttcgaggcaggtgtgggcctc
tatcttgatgacgtgtatctgaaccgtccgcaggcggccgttctcgacatttatgatgtg
gagcgggtcgaggtgctgcgcggtccgcagggcacgctttatggccgcaacacgatcggc
ggcgcggtcaaatatgtgacgaagcgtctgaccacggaccccactctgtcggtgcgtggc
acctatggcagctatgatcaggccgatggcgtcatcacggcatcgacgccggtcggcgat
gggacgctgaagttcggcggggcgctggcgcgcctgtcgcgtggcggtttcggcgacaat
ctgacgaccggccgggaaaactataacaaggacgtctgggcagggcggttgagcgcgcag
gccgatggcgagggtttctttgtccgactgaccggcgattacaccaaggacaagagcgaa
ccgcgcggcggccatcgcctgatccccggccttttcagcggcgcgccggtgctgaacgat
gtctacgatacgcgtgctggcctgctcgatcccaagcaggacgtagaggcctatggcgtt
tccctgttcggcgaattcgaagtcacggacggtttcacgctgcgttcgatcactgcctgg
cgcaaggacaacagcgctacgccgatcgatttcgacagcctggcggcggtcgatggcgat
gtgcccgccttccataacaaccgtcagctttcgcaggaaatccagctgctggtgagcacc
ggcaacctgaacggcctgatcggcggctatttcctcgacgccaaggcgcgcaccgtgttc
gacgcgcgcctgcccggcggggtcacgcccctgaccttcggcgatgtgggcaccgaaacc
ttcgcgatcttcggcgacttcacctacgacttcacgccgcaactcagcctgtcggtcggc
ggtcgctatacctgggatgaacgcacgtcgcagatcctgcgccgcacctatctgggtggc
ggatcgcccttcttcggcggtacggggacgctgtttgccaccacctccgatttccgcggc
tcgcagacgttcaaggaattcacgccgcgcgcctcgctgtcgttcaagccgacccaggac
cagacgctctatgcaagctatgccaagggcttcaagggcggcggcttcgacccgcgcggc
caatccaccgcatgccgcacacccaccggcggcacgtgcaccccgcagcaggtgttcgat
ttcctctcgttcgatccggaaacggtcgaaacctatgaagtcggttacaaggcgtcctat
ggccgccgcctgaccatcgcattgtcgggtttctattccgattataccgatgtgcaggtg
cccggttcgatcggcaccacggtcaatggtcagcagacgttcgtgggcatcaccaccaat
gcgggcaaggcgcgcatccagggtatcgagttcgaaggaaacctgctggtcgccaaggat
atcggtgcgcctggcagccgcctgaacctcaactgggcgggcggttatatcgacgccaag
tacaagcagttcatcgattcgcgcggtatcgacgtcgccaaccggcgcgcgttccagaac
acgccgaaatggaccgcttcgggcacgctggcttattcgatcccggcctttggcggcgat
atttcgaccagcaccacggtttcctatcgcagcaagtcgcagcagttcgaactgcgcacg
ccgggtctggatcaggccggctatgcgctgtgggatgccagcatcgtgtggacgtcggaa
ggcggccgttattcgctgggcgtgcatggccgcaacctgaccgacaagcagtatatcgtg
tcgggcaacaacttcctcagccagaatccggacaccggcaatttcaatcgcaacgctgcg
ggcgcgctgatcccgacgctgggccgcgaaggcgtgctgactgcctattacggcaatccg
cggcaggtgttcgtgtccgctggcgtgaagttctga
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