Rhizorhabdus wittichii RW1: Swit_5265
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Entry
Swit_5265 CDS
T00538
Name
(GenBank) putative methylase/helicase
KO
K26273
protein strawberry notch
Organism
swi
Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
swi03036
]
Swit_5265
Chromosome and associated proteins [BR:
swi03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
Swit_5265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
MTS
Motif
Other DBs
NCBI-ProteinID:
ABQ71373
UniProt:
A0A9J9LGL8
LinkDB
All DBs
Position
pSWIT01:complement(156053..160291)
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AA seq
1412 aa
AA seq
DB search
MSDLFAAAGASDRLAAQALLPLLRRGGPITRRQLNEAMTSAFGGSDADGRWTQRDSFELL
EHATVLYLRERPYTLESFADVTQAHALVQRLPTQTVRSEAQIAWQQFSTPADIAALAVLL
ADVGPQDVVLEPSAGNGLLVAQLGDHRSLQLNELDPTRRSRLAALFPDALITGHDGAAIG
SLMAHQERPSVILMNPPFSRSLGRGADDRAAVRHLQAALRHLAPGGRLVAIMPDWFGPNA
RMRDHFETVLREASVRTSLRLEKCYTKHGTSIAVRLFVIDKVAGNAPPAVIQRASVEELA
AVLTVPPRAAPPVVAAPVRAAPVSGKGISLFRAVKSAPVKPRAYFAPARNDVLPVDYERL
EAPAPLLEQTGVYLPYRPSRIVFDKAGDHPTALVESVAMGSIAAPIPHYVPRLPERTVSE
RLLSASQLETVVYAGHAWSQTLPGRFKPDKEGVGLVLAEDGRTYRKGFFLGDGTGAGKGR
QVAACILDNWLQGRRRNIWVTKNEPLLEDARRDWTALGGVSADVQPVGNWKIDEPITLEQ
GVLFVTYPTLRSARGDHSRLKQILDWAGEDFEGVIFFDEAHEMGGVAGGEGALGAKAGSQ
QGICGVLLQNHLPGARVGYASATGASDINNLAYAVRLGLWGPETSFPDREQFISSIRQGG
IAAMELVARDLKASGLYLARALSFAGVEYDILKHELTPAQIEIYDIYADAWAIIHRNMEA
ALELTGVVDGLEGNTLNSGAKASARSRFESTKQRFFGQVLLSMKLPTVIAAAEQHLAEGK
SVVMQLVTTAESILDRRLGQLAPDERAELDIDLSPREYVIDYLERAFPTRQMRVFTDDTG
AERSVPMDDENGNPVYNPQALAARANLIEQLCALPPITSALDGLLNHFGHDYVAEITGRT
KRLIQASDGRQKLETRSTRTSQAEAAAFMGGLKRILIFSDAGGTGRSYHASLDAVNQEQR
AHLLLEPGWRADRAIQGLGRTHRTHQACTPLFRPVTTDCKGELRFTSTIARRLDTLGALT
RGQRQTGGQNLFDPADNLESSYACAALTSWFHLLHLGKLKSTTLAEFEERTGLELTDKDG
VLKDELPPIQRWLNRLLALPIGLQNRIFEEFLALVETRVQAAREAGRLDVGVETMLVDTA
TIIDDTILRTDPVSGATSHLLTIEVARRKTPVSLERILRIAESHPRHAFLRNAKSGLVAL
QVKARAHMEEKDGTPIPRIELMRPTRNDYMRLADLAETAWSPIDEEAFRALWAAEAEAAA
AQVDTETIRLATGLLLPIWSALPSDHLVVNRIADQSGQSWLGRIVFDDHVVQLYTKLGLD
RAENLPPGDIVKSALGGRSVELTQPFPMAIKRAVVNGLPRIELVGAPPAQLAYLKSLGCF
TEIISYRTRVFVPVEGAADILSRLLRPEARAA
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatctcttcgccgccgccggcgcatccgaccgccttgccgcccaggccctgctt
cccctgctgcgcagggggggccccatcacccgccgccagctcaacgaagcgatgacgagc
gcctttggcggcagcgacgccgacggccgctggacgcagcgcgacagcttcgaactcctg
gagcatgcgaccgtcctctatctgcgcgagaggccctataccctcgagagcttcgccgac
gtgacgcaggcccatgcgctcgtccagcgcctgccgacccaaaccgtgcgcagcgaagcg
cagatcgcctggcagcaattctcgacgcccgccgatatcgcggcgctcgcggtgctgctc
gccgacgtcgggccgcaggacgtggtgctcgagcccagcgcgggcaatggccttctcgtt
gcgcagctcggagatcatcggtcgctgcaactcaacgaactcgatcccacgcggcgatcg
cggctggcggccctgttccccgacgccctcatcaccgggcatgacggtgccgcgatcggg
tcgctcatggcccaccaggaacggccgagcgtcatcctgatgaacccgcccttctcgcgc
tcgctgggccgcggcgctgacgaccgggccgctgtgcggcacctccaggcggcgctgcgc
caccttgcaccgggtggacgcctggtggcgatcatgcccgactggtttggccccaatgcg
cgcatgcgcgaccatttcgaaaccgtgctgcgcgaggcgagcgtgcggacatcgctgcgg
ctcgaaaaatgctacaccaagcatggcacgagcatcgccgtgcggctcttcgtcatcgac
aaggtcgcgggaaacgcgccgcccgccgtcatccagcgcgcatcggtcgaagaactggcc
gcggtcctcaccgtgccgccgcgtgccgcgccgcccgtcgtggcagcgcccgtccgcgcg
gcgccggtgtccggcaaaggcatctcgctcttccgcgcggtcaagagcgctccggtcaag
ccgcgcgcctatttcgcaccggcgcgcaacgacgttctcccggtcgattatgaacgcctc
gaagccccggcaccgctgctggagcagaccggcgtctatctgccctatcggccgagccgc
atcgtattcgacaaagcaggcgaccacccaaccgcactcgtggaatccgtcgcgatggga
tcgatcgccgcgcccatcccgcactatgtgccccgcttgcccgagcgcaccgtgtcggaa
cgcctgctctcggcctcccagctcgaaaccgtcgtctatgccggccatgcctggtcgcag
acgctcccggggcgcttcaagccggacaaggagggcgtcgggctcgtccttgccgaagac
ggccggacctatcgcaagggcttcttcctgggcgacggcaccggggccggcaagggccga
caggtagccgcctgcatcctcgacaactggctgcaggggcggcggcgcaacatctgggtc
accaagaacgagccgctgctcgaagatgcgcggcgcgactggaccgcgctcggcggcgtc
tcggccgatgtgcaaccggtcggcaactggaagatcgacgagcccatcaccctcgagcaa
ggcgtcctgttcgtcacctatccgaccctgcgctcagcgcgcggcgatcatagccggctc
aagcagatcctcgactgggcgggcgaggatttcgagggcgtcattttctttgacgaagcg
cacgagatgggcggcgtcgctggcggggagggggcccttggcgcaaaggccggctcgcag
cagggcatctgcggcgtgctcctccagaaccatctgcccggcgcgcgcgtcggctacgct
tcggccaccggcgcctcggacatcaacaatctcgcctatgcggtccggctcgggctctgg
ggcccggaaacctccttccccgatcgcgagcagttcatctcctcgatccggcaaggcggc
atcgccgcgatggagctggtcgcccgcgatctcaaggccagcggcctctatctcgcccgc
gccctgagctttgccggggtcgaatatgacatattgaagcacgagctgaccccggcgcag
atcgagatctacgacatttatgccgatgcctgggcgatcatccatcgcaacatggaggcc
gccctcgagctgaccggcgtcgtcgacggcctcgaaggcaatacgctcaacagcggcgcc
aaggcctcggcgcgctcgcgcttcgagtcgaccaagcagcgcttcttcggacaggtgctc
ctgtcgatgaaactgccgaccgtgatcgcggcggccgagcagcatctcgccgaaggcaag
tcggtggtcatgcagcttgtcaccacagccgagtccatcctcgaccgccgcctgggccag
ctcgcgccggatgagcgcgccgaactcgatatcgacctgagcccgcgcgaatacgtcatc
gactatctcgaacgcgcctttccgacccggcaaatgcgtgtcttcaccgacgacaccggg
gccgagcgatcggtgccgatggacgacgagaacggcaatccggtctataatccgcaagcg
ctcgcggcgcgcgccaatctcatcgagcagctttgcgcgctgccgccgatcacctccgcg
ctcgacgggcttctcaatcatttcggccatgactatgtcgccgagatcacgggacgcacc
aagcggctgatccaggcgagcgacgggcgccagaagctcgagacccgctcgacccgaacc
agccaggccgaggccgccgccttcatgggcggcctcaagcgcatcctcatcttcagcgac
gcgggcgggactggccgctcctatcatgcgagcctcgatgcggtgaaccaggagcagcgg
gcccatctcctgctcgaacccggctggcgggccgaccgggcgatccagggtctggggcgc
acccatcgcacgcatcaggcctgcacgcccctgttccggccggtaaccaccgactgcaag
ggcgagctgcgcttcaccagcaccatcgcccggcgcctcgatacgctgggcgcgctgacc
cgggggcaacgccagaccggaggacagaatctcttcgaccccgccgacaatctggaaagc
agctacgcctgcgcggcgctgacgagctggttccacctcctgcacctgggcaagctcaag
agcaccacgctcgccgagttcgaggagcgcaccggcctcgagctcaccgacaaggacggc
gtgctgaaagacgagctgccgccgatccagcgctggctcaaccggttgcttgcgctcccg
atcgggctgcagaaccggatcttcgaggagtttctcgccctcgtcgaaacccgggtacag
gccgcgcgcgaagcgggtcggctcgacgtcggcgtggaaaccatgctcgtcgataccgcg
acgatcatcgacgacacgatcctgcgcaccgatccggtcagcggcgcgacctcccacctc
ctcactatcgaggtagcgcgccgcaagacgccggtctcgctcgagcgcatcctgcgcatc
gccgaaagtcatccacgccacgccttcctgcgcaacgccaagtccggcctggtcgcactg
caggtgaaggcccgcgcccatatggaagagaaggacggcacgcccatcccccgcatcgaa
ctcatgcgcccgacccgcaacgactatatgcgccttgccgatctcgccgaaaccgcctgg
tcaccgatcgacgaggaagctttccgcgcgctctgggccgccgaggccgaagcggcggcg
gcgcaggtcgataccgagaccatccggctcgcgaccgggctcctgctgccgatctggtca
gcgcttccgagcgaccatctcgtcgtcaaccgcatcgccgaccagagcggccagtcctgg
ctcggccgcatcgtcttcgatgatcatgttgtgcagctctacaccaaactcggcctcgat
cgcgccgagaacctgccgcccggcgatatcgtcaagtccgcgctcggcggacgcagcgtc
gaactgacgcagccgttcccgatggcgatcaagcgcgccgtggtgaacggtctgccccgc
atcgaactggtgggcgcgccgcccgcgcaacttgcctatctcaaatcgcttggctgcttc
accgagatcatcagctaccgcacgcgcgtgttcgtgcccgtggagggtgctgccgatatc
ctcagccggctgctcaggccagaggcccgagcggcatag
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