Syntrophomonas wolfei: Swol_0006
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Entry
Swol_0006 CDS
T00396
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
swo
Syntrophomonas wolfei
Brite
KEGG Orthology (KO) [BR:
swo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
swo03032
]
Swol_0006
03400 DNA repair and recombination proteins [BR:
swo03400
]
Swol_0006
Enzymes [BR:
swo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Swol_0006
DNA replication proteins [BR:
swo03032
]
Prokaryotic type
DNA Topoisomerases
Swol_0006
DNA repair and recombination proteins [BR:
swo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Swol_0006
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
ABI67365
UniProt:
Q0B0Y9
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Position
5973..8411
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AA seq
812 aa
AA seq
DB search
MAQDSLFEKVIPIDIEKEVKKSFLEYSMSVIVSRALPDVRDGLKPVHRRILYALHEQGMT
HDKPHKKSANIVGEVMGKYHPHGDAAIYQTMVKLAQEFAMRYPLVDGHGNFGSIDGDAAA
AMRYTESRMSRIAAELLKDIDKDTVDWRPNYDESREEPQVLPARIPNLLLNGSAGIAVGM
ATNIPPHNLREIVKGIKEYIDNPDITIEELMQSIPGPDFPTGGILEARGIRQAYETGRGT
IRTRARYEIEEKKGGKFSIVVTEIPYQVNKARLVEKIAELVRDKKVEGIVDLRDESDRKG
IRIVIELRKDVNVNVILNKLFRHTQMEDSFGIIMLSLVNGEPRILNLKEMIQYYVEHRQE
VINRRTTYELNLAKNRKHILEGLKIALDNLDEIINLIRNSRDRENARGELQSRFNLSEIQ
ANAILDMRLVQLTGLERSKVENEYEEVLLRIADYEDILARPERVLSMIKEDLDDIEKRYG
DNRRTEISQEESSYEEEDFIDDHEVVITLSNRGYVKRQPLDTYRSQKRGGKGVSATTIRA
EDFAHDVLVTSALATLLFFTNQGRVFTTRAFQIPESSRQAKGMPLVNFLELRPGEKVTTI
VGAREFNREHHLLMVTKKGIIKKTALKAFQNVRKSGLIAVNLREDDELVGVIRVKTGSKV
MIANSRGISIMFDEKQVRSMGRTAAGVKAINLSKDDYVVGLDRYREGADVLLVTEKGYGK
RTALSEFKLQNRGGKGLKAIEITRRNGKLVAFQIVSKEDELVILTSEGNIIRLEVEDISQ
QKRYSRGVLLMRLPEEDRIVGVARFKIEKEED
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
ttggcacaggatagtctatttgaaaaagtaatacccatagatatcgaaaaggaagtcaag
aaatcctttctggaatactccatgagtgtcatagtatcccgtgccctgcccgatgtaaga
gatggactaaaaccggtacatcgccggattttgtatgctttgcatgaacagggtatgacc
catgataaaccacataaaaaatcagccaacatcgtgggagaagtaatgggtaaataccat
ccccacggggatgcggccatttaccagaccatggttaaactagcccaggaatttgctatg
cgttatcccctggttgatggacatgggaactttggttccattgatggagatgccgctgcc
gccatgagatataccgaatctcgaatgtcccggatagcggcggaactgcttaaagacatt
gataaggacaccgtagactggcggcccaattatgatgaaagccgggaagaacctcaggtt
ttaccggcgcggatacccaatcttttactcaacggctcagccgggatagctgtaggtatg
gccaccaatattcccccccataatttgcgggaaatagtaaagggaataaaagaatatatt
gataatccggatataactatcgaagaactgatgcaaagtattcctggcccggattttccc
accgggggaattttggaggcccgcggcattagacaagcttatgagaccgggcgcggaacc
atcagaaccagagctcgttacgaaattgaggaaaaaaagggcggcaagttttctattgtg
gttaccgagataccctatcaagttaataaagcccgcctggtggaaaagattgccgaactg
gtaagagacaaaaaagtagaaggtatcgttgacctcagggacgaatccgaccgcaaagga
atccggatagtcattgaactgcgcaaagatgtgaatgtcaatgtaatcttgaacaagctc
ttccggcatacccagatggaagatagttttggcattatcatgcttagcctggttaacgga
gaaccccggatactgaacctgaaggaaatgatacagtattatgtggaacaccggcaggaa
gttattaaccggagaacaacatatgagctgaatctggccaaaaaccgcaagcatatcctg
gaaggtttgaaaatagccctggataacctggacgaaatcataaatctgataaggaactcg
cgcgatcgggaaaacgccaggggagaattacaatcccgttttaacttaagcgaaatacag
gccaacgctatactggatatgcggctggtacaattaaccggactggaaagaagcaaagta
gaaaatgaatatgaggaagtactgttaagaatagccgactatgaagatatactggcccgt
ccggaaagggtacttagcatgataaaagaagacctggatgatattgaaaaacgctacggc
gataaccggcggacagagataagccaggaagaaagcagctatgaagaagaagattttatc
gatgaccatgaagtggttataaccctcagtaatcggggatatgtcaaacggcaacctctg
gatacctatcgttcccagaaaaggggaggaaaaggggtaagtgctactactatccgagcg
gaggattttgcccatgatgttctagttacttctgccctggccaccttgcttttctttacc
aaccagggccgggttttcaccacccgggcttttcagatacctgaatcaagcaggcaagcc
aaaggcatgcccctggtgaactttttggaattacgccccggggaaaaggttactactata
gtgggcgcgcgggaatttaatcgcgaacatcacttgctgatggtaacaaagaaaggaata
atcaagaaaaccgctttgaaggctttccaaaatgtaaggaaatcaggattgatagcggtt
aacctgcgtgaggacgacgaattggtgggagtgatacgggtaaagaccgggagtaaagta
atgatagccaattcccggggaatatcgataatgtttgatgaaaagcaggttagaagcatg
ggcagaacggctgccggggttaaagccattaacttgtcaaaagatgattatgtggtagga
ctggatcgctaccgggaaggtgctgatgttttgctggtaacggaaaaaggctatggcaag
agaaccgccttaagcgagttcaagttacagaatcgtggaggtaaaggcctaaaagctatt
gaaataactaggaggaacggaaagctggtagccttccaaatcgtatcgaaggaggatgaa
ctggttattttaacgagtgaaggtaacattatccggctggaagtagaggatatatcgcag
cagaaacgctactcccggggagttttattgatgaggttaccggaagaagaccgtattgtt
ggtgtggctcgttttaagatagaaaaagaagaggactag
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