Syntrophomonas wolfei: Swol_0302
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Entry
Swol_0302 CDS
T00396
Name
(GenBank) putative helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
swo
Syntrophomonas wolfei
Brite
KEGG Orthology (KO) [BR:
swo00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
Swol_0302
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
ABI67646
UniProt:
Q0B058
LinkDB
All DBs
Position
356311..361947
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AA seq
1878 aa
AA seq
DB search
MYIESAFPLRYEILNQERSSILSQTGFLSQPPLLETLPIYPSSGKSLELACRHLPREYRD
LPNLAKNLFPEGMELYQHQLAALGEVIMNRRDIVVTTGTGSGKTECFLLPILAELVKDSI
SWPQCHQPPPNRKWWRKDGTSSGNRVGQFEHSARNKVNTHAVRAMILYPLNALVEDQLRR
LRVTLDSPGVHQWMDEHRGGNRILFGRYTGLTPVSGWPSNKNALNRLVSRLRELDAELLK
VANLDEDIQYYFPNMDGGEMWSRWDMQETPPDILITNYSMLNIMLMRRIEEQIFDKTRNW
LAQDRANKFFLVIDELHSYRGTPGTEVGYILRLLLDRLGLNINSEQLVIIATSASITDSL
ESRKFLREFFGRDRFRIISGSEILPPKGSRYSIKKWADHLSVFRRRVEPDIMDPMIPPNP
GDPESQKAMEELAIIMGADTSYNTTPDAMLAKALFDNGIPEAVRDACHAIHGSVRPTKIT
ELDKILFPNIKHNGVASDAMIGLLLAMALGKNPETGQSIQPVRGHLFFHNLQNLWVCSNP
KCSDPSCAETKRFEAMGTQEEVPVGSLHFRHRLTCTCGGRVLDLIVCEVCGEVFLGGYRV
SRKINSTRFEILTSDQPDLEKMPDQTSVLKTYEKYAVFWPIQKGTEVKPEDEQYQVNNIV
RRWKAGRLNVFSGVLRQDNKAPDDNEVGGWIYVIGGDNPNEPSLPTKCPRCGADYRSKMV
SSPLRNHRTGFQKACQVLASALFREMNPFTDNQSFRKLVVFSDSRQDSAKLAAGMEQDHF
RDMIRLALLQAISKYWMEFAAFWRTTVKVMPQVAHKIQEINPELYSTVIEPQKTEDEVHR
YRFQKSHIQMMSEIMNWSLGMNPTNLDVYNTMLKMIKFYPGKVPLFELRGVIREIMLGLG
MNPGGNEYRVNTYYVQEGGRGKPHAWHECYNWNSSEAQEKAQLVPEARRLLGLMDNCLAE
EVMHVLFPHVARTFEGLGQGWVTYEETTNATDLIIQATNSAIRLLGGRKTHRYQRGYKAG
SETKLPRYVSNYLSVIGVSAAEVETEMVHSKAGMGGLSSLGLDPDYLYLNLSHFDHEETR
PQGWRCVTCNAFYLQPAGGFCPECASQRQSHRLVPSNPQSHLDYYLYLASQSGPAFRMHC
EELTGQTDYIDRIRRQRWFQDVFVEDEIPLVHGVDLLSVTTTMEAGVDIGPLLAVMMANM
PPRRFNYQQRVGRAGRRGSGLSIALTFCRGRSHDDYYYERPEQVTGDPPPLPYVDMNNEK
IIRRVLIKEVLRMAFRSLPDDIFPPDPRDSVHGEFGSVEDWPGVSGEIQNWIHNPENEGK
IVDIFRALTQGTLWDSSTKNHEMFLTQNIVSLRKELVNAVSEVTQSPYYTQEFLSERLAN
AGYLPMFGFPSRIRNMYTRWPSNANPWPPSSGLIDRDLEVAISQFAPGSQLVKDKAVHTA
CGVVDLYPKGNQVASKPGFIPDLIEGNPSPVGICGHCQAVMYLPGTAITALGGRTPEVIQ
CPVCSAVEMRRLDAREPKGFFSDLTPGDFEGVFEWVPNSTRPFLAIKADNPHPIHVNNVC
ISSFADEIISINDDGGKGGFDFQQAKVHNRSIPGAYAVSPASDLFIKVNGPAWRIALLAK
RYTDVLLVDLNHWPEGIFADPTTVEGRAAWYSFAFTLRMAAAVELDIDTTELDAGFQVKN
REGFPVGLAFLCDKLENGAGYSRWLGSETSFHKLLRQGFLTEPSSMATHWMEHKHKSACD
TSCNLCLRDFYNSMYHGLLDWKLGLDMLHLASDQNTSIDLTSSWGNYDNPWTSLVNGDTS
KIAVTMQNLGYQPPTNIEGLNVYIHRSRPQVWVERHPLWTDSHSVYQTVYYEISSKYRQH
TIKPMNPFMAIRRPADFV
NT seq
5637 nt
NT seq
+upstream
nt +downstream
nt
atgtacatagaaagtgcttttcccctccgttatgaaatacttaatcaggaaagatctagt
atattatctcaaacgggtttcttatctcagccaccactactagagacactacctatatac
ccttcatccggtaaatcattggagttagcatgtcgacaccttccccgggagtatcgtgat
ctacctaacttagccaaaaacctctttccggaagggatggaactataccagcatcaattg
gctgcattaggggaggtcataatgaaccggcgggatatcgtcgtcaccaccggaactggt
tcaggcaaaactgaatgttttctattgccgatcctagctgagttagtcaaggactcaata
tcctggccgcaatgtcatcaacctccaccgaatagaaaatggtggcgaaaagatggtaca
agcagtggtaaccgcgtaggacagtttgagcactcagcaagaaacaaggtaaatacccat
gcagttagagcgatgatactgtatccgcttaatgcgttagttgaagatcaattacgtaga
ttaagggtgactcttgactctcccggagttcaccagtggatggatgaacatcggggagga
aatcgtatattatttggccgatataccggcctaacccctgtatccggttggccttcaaat
aaaaatgcgctcaaccggttggtttccagactgagggaattggacgcagaactgttaaaa
gtagctaacttggacgaagatattcaatactatttccccaatatggatgggggagaaatg
tggtcaagatgggatatgcaagaaacgccccccgatattcttattaccaactatagcatg
ctcaatattatgttaatgcggcgtatagaagaacaaatatttgataaaacccgaaattgg
ttagcccaggatagagcaaataagttctttttagtgatcgacgaactgcattcatatcga
ggaacgccgggtactgaagttggatatatactccgccttttattagaccgtttagggtta
aacatcaattcagagcagttagtaattatagctacatctgcaagtataaccgattccttg
gaatcgaggaaatttttacgagagttttttggcagggatcgtttcagaatcatttctggt
agtgaaattcttccaccaaaaggatcgcgttatagcattaaaaagtgggccgatcacttg
agtgtatttcgccgtagggtggaaccggatataatggatccgatgattccccccaacccc
ggcgatccagaatcccagaaggctatggaagaattggctataattatgggagcagataca
agttataacactacaccggatgcaatgctagccaaagcactgtttgataacggtatacct
gaggcagtaagggatgcctgtcatgctatccacggcagtgttagacccacaaaaataact
gaattggataagattttattccctaatatcaaacataacggagtagcttctgatgctatg
attgggttgctattggcgatggccctagggaaaaatccggaaacaggccaatctattcaa
ccggttcgaggacatttattttttcataacttacaaaatctctgggtatgtagcaacccc
aaatgttcagatccgtcttgtgcggaaacaaagcgatttgaggcgatgggtacacaagaa
gaagtcccagtaggatccctacatttcagacatcgcttaacctgcacttgtgggggacgg
gtattagacctgattgtttgtgaagtatgtggggaagtttttttgggggggtatagagta
tcccgtaaaattaactctactcgatttgaaatactcacatctgaccaaccggatcttgag
aaaatgcctgatcagacatcggtacttaagacatatgaaaaatatgctgttttctggccg
atacaaaagggaactgaggtaaaacctgaagatgaacaataccaagtaaataatatagtt
cgacgatggaaagctggacggttgaatgtattttctggtgttctccgtcaggacaataag
gcaccggatgataatgaggttggtgggtggatttatgtaatcgggggcgataatcctaat
gaaccatccttgccaactaaatgcccacgctgtggagcagattatagatcaaaaatggtt
agttctcctctcaggaatcaccgtacagggtttcaaaaggcatgccaggtactggccagt
gcgctttttagggaaatgaatccgtttactgataatcaatcattccgtaaattagtggtt
ttttcggatagtcgtcaggattcagccaagttggcggcaggtatggagcaagaccacttt
cgagatatgattagactggctttattacaggcaatttcgaagtattggatggagtttgcg
gcattctggagaaccactgttaaggtaatgcctcaggtagcacataagattcaggagatt
aatcctgaattgtattctacagtaatagaacctcaaaaaacggaagatgaggtgcacagg
tacagatttcaaaaaagtcatatccaaatgatgagcgaaattatgaactggtccttaggt
atgaacccaaccaatctagatgtctataacactatgttaaaaatgatcaaattctatccg
ggtaaagtgcctctttttgaacttagaggagtaatacgcgaaataatgctgggactgggg
atgaatccgggtggtaatgaatatcgagtgaatacctactatgtgcaggaagggggaagg
ggcaaaccccatgcttggcatgagtgttataattggaactcttctgaagctcaggaaaag
gcccaactggtaccagaggcccgaagattgcttggtttaatggataattgcttggctgag
gaagttatgcatgtacttttccctcatgttgctcgtacctttgaaggattgggccaaggt
tgggtgacctatgaagaaacaaccaatgctactgatttgataatacaggcgaccaattca
gccatacgtcttttaggggggcgaaaaactcaccgttatcaaagaggttataaagcaggt
tccgaaactaaattaccgcgttatgtctccaactatctttcggtcattggagtttctgca
gcagaggttgaaacagaaatggtccattcaaaagccggcatgggagggttatcttcgtta
ggactggatcctgattacctttatctaaacctttctcattttgatcatgaagaaactcgg
cctcaaggctggcgatgtgtgacttgtaatgctttttatcttcaacccgcaggtggcttt
tgcccggaatgtgcttcgcaaaggcagtcccacaggttagttcccagtaatccgcaatcc
catttggactactatttatatcttgcttctcaatcagggccggcatttagaatgcattgt
gaagagttaaccggacaaaccgattatatagacaggatacgaaggcaacggtggttccaa
gatgtttttgtggaggatgaaataccattggtgcacggggtggatttgcttagtgtgact
acaacaatggaagcaggggtagatattgggcctcttttagctgtaatgatggcgaatatg
ccaccccgaagattcaattatcaacagcgggtaggtcgagccgggcgtagggggagtggt
ttatcaattgcattaaccttttgtcgggggcgcagccatgatgattactactatgaaaga
cctgaacaagttaccggtgatcccccgccattgccgtatgttgatatgaataatgagaag
attattcgtcgggtcctaatcaaagaagtattacgtatggcattccgttcattaccagat
gatatattcccaccagacccgagagacagtgtacatggggagtttggttctgttgaagat
tggccgggtgtatcaggagagatccaaaactggattcataatccggagaacgaggggaaa
attgttgatatttttcgggcccttactcagggcaccctctgggattcatcaacgaaaaat
catgagatgtttttgacacaaaatatagtctccttgcgtaaggaattggttaatgcagtc
tcagaggttacccaaagtccatattatacacaggagttccttagcgagagactggctaat
gccggctacttaccaatgtttgggtttccaagtagaattcgtaatatgtatactcggtgg
ccttctaacgctaatccctggccaccatccagcgggttgatagatagagatctggaagtt
gctataagtcagtttgctcctgggtcccaactggtcaaagataaagccgtacatacagca
tgtggtgttgtagatttataccccaagggcaaccaagtggcatctaaaccgggatttatt
cccgatcttatcgaaggcaatcctagcccggttggaatatgcggacactgtcaagcggta
atgtatcttcctggaactgccattacagctctggggggcagaaccccagaggtaattcaa
tgccccgtttgttcagcggtagaaatgaggcgccttgacgctcgtgaacccaaaggcttt
tttagcgatttgacacctggagattttgagggtgtttttgaatgggtaccgaattccacg
cgtccatttctggcaataaaggcggataacccccaccctatacacgtcaacaatgtgtgt
atttcctcctttgctgatgagattatttctattaatgacgatggcggtaagggcggtttt
gattttcaacaggctaaagtacataaccgatctatacctggggcttatgctgtatcaccg
gcgagcgatcttttcataaaagtaaacggaccagcttggagaattgccctgctggcgaag
agatacactgatgtgttacttgtggatttaaaccattggccagaaggtatatttgctgat
cctaccactgtcgagggtagggcagcctggtattcttttgcatttactttgaggatggct
gccgcagtggagttagatatagatacgacagaattggatgctggatttcaagttaagaac
cgggaaggattcccggttggcttggcttttctctgtgacaaattagagaacggagccggt
tattccaggtggttggggagtgaaacaagttttcataaacttctgcgacaaggattttta
accgaacctagtagtatggccacgcattggatggaacacaaacataaaagtgcctgtgac
acttcatgtaatctgtgtttaagagatttttataactctatgtatcatggacttttggat
tggaagctaggattagatatgttgcacctggctagtgaccagaatacgtccattgacctc
acatcttcctgggggaattatgataatccgtggaccagtctagttaatggtgatacatcg
aaaattgctgttaccatgcaaaaccttggttaccaacccccaacaaatattgaaggccta
aatgtttatattcatcgttcccgtccccaggtctgggttgagagacaccctctttggaca
gatagtcattctgtttaccagaccgtttattatgaaatcagtagtaaatatcgacaacat
accattaaacctatgaatcctttcatggctattaggagaccagcagattttgtttag
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integrated database retrieval system