Syntrophomonas wolfei: Swol_0840
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Entry
Swol_0840 CDS
T00396
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
swo
Syntrophomonas wolfei
Brite
KEGG Orthology (KO) [BR:
swo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
swo03032
]
Swol_0840
03400 DNA repair and recombination proteins [BR:
swo03400
]
Swol_0840
Enzymes [BR:
swo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Swol_0840
DNA replication proteins [BR:
swo03032
]
Prokaryotic type
DNA Topoisomerases
Swol_0840
DNA repair and recombination proteins [BR:
swo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Swol_0840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Rad50_zn_hook
Zn_ribbon_19
Zn_ribbon_GRF
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ABI68159
UniProt:
Q0AYP5
LinkDB
All DBs
Position
959931..962015
Genome browser
AA seq
694 aa
AA seq
DB search
MAGTTLLIVESAAKARTLGKFLGKGYKIKASVGHVRDLPKSKLGVDVENDFEPQYITIRG
KGDILKEIKDESQKAGRVLLATDPDREGEAIAWHLQNAMKIPPEENCRIEFHEITREAVK
KAIKNSRPVDLSRVNAQQARRVLDRLVGYNLSPLLWNKIRKGLSAGRVQSVALKLICDRE
EEIKNFIPQEYWTVDAIFNAAKGKNSKFTARLASYQGKKIEINSDKEVAAIGEYLQGANF
TVLKVERKEKRKNPNPPFITSTLQQEASRRLNFFSNRTMRVAQELYEGLEIGKEGTVGLI
TYLRTDSTRVASSAQMEALDFINSTFGAEFAPDKPNEYKSRKSAQDAHEAIRPTSIQRTP
ESVKAFLSRDQYRLYQLIWNRFVSSQMTPAVYDSLTVDISAGDYGFRASSSQLKFIGYKK
VYSDNEEEEPKNNIPELKKGEELALHELKPEQHFTQPPPRFSEASLIKLLEEKSVGRPST
YAPTIDTILKRNYVERQNRQFIPTELGFIVVDLLKEHFANILDVEFTARMEGELDLVEEG
KLDWKKVVRDFYEPFHSDLEKARELAQKIEIKDEEAGKECPQCGRPMLIKHGRFGKFMAC
SGFPECRHTQSINQELGLKCPLCQGSIVALKSKKGRTFYGCSNYPQCNFRSWDKPTGKIC
PHCGDAIVEKFNKKKEATQICQNPACKQKVEMGG
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
ttggcaggaactacactgcttattgtagagtcagcggccaaagccagaaccttagggaaa
tttctgggcaagggctataaaataaaagcatcggtggggcatgttcgcgacttgcccaag
agcaaattgggagtcgatgtggagaatgattttgaaccccagtatattactattcggggc
aaaggagatatcctgaaagagattaaggacgaatcccaaaaagccggtcgcgttttacta
gctaccgaccccgatcgtgaaggagaagctatagcctggcatttgcagaatgctatgaaa
attccgccggaggagaattgccggattgaattccatgagattacccgtgaggcggtaaag
aaggccattaaaaattcgcgcccggtggatttaagccgggtgaatgcccagcaggcccgc
cgggttttggaccgcctggtaggctacaacctgagccctttgctttggaataagattcgc
aagggcctgagtgcgggcagggtgcaatcagtggctttaaagttaatctgtgatcgggaa
gaggaaataaagaacttcattccccaggaatattggaccgtagatgccatttttaatgct
gctaagggcaagaatagcaaatttactgctcgtctggccagctaccaggggaagaaaatc
gaaatcaacagtgataaagaggtggcagctataggagaataccttcaaggcgccaatttt
actgtgctcaaagtggaaagaaaggaaaaacgcaagaaccccaaccccccgtttattacc
agtactttacagcaggaagcttcccggaggcttaatttcttctccaaccgtactatgcgg
gtagcccaagaattatatgaaggtttggaaattggtaaagagggtacggtaggattaatt
acctatctcagaactgattctacccgggtggccagctcggcgcaaatggaagccctggac
tttattaattctacctttggagcggaatttgctccggacaaacccaatgaatataagagt
aggaaatcagctcaggatgcccatgaagctattcgcccaacttccatccagcggactccg
gagagtgtaaaagcgtttttaagccgggatcagtatcgcttatatcaattaatatggaac
cgctttgtttccagtcaaatgacccctgcggtttatgatagtttgactgtggatatctcg
gctggagactacggtttcagagccagttcatcacagcttaaatttattggctacaaaaaa
gtctacagcgataatgaagaagaagagccaaagaataatattccagagcttaaaaaggga
gaagaacttgcactgcatgagttaaagccggagcagcactttacgcaacctccaccccgc
tttagtgaggccagtctaattaaattgctggaagaaaaaagtgttggccgtcccagtact
tatgctcctaccatagataccattttaaagcgtaattatgtggaaaggcagaaccggcag
tttattcccacagaattgggctttattgtagtggatttactcaaggagcatttcgccaat
attctggatgtggaatttaccgcccggatggaaggcgaattggatttggtagaggaaggc
aaactggattggaaaaaggtggtacgcgatttttatgagccgtttcactctgacctggag
aaggcccgtgagctggcccagaagattgagatcaaggatgaagaggctggtaaagaatgc
ccgcaatgtggaagaccgatgcttataaaacacggtcgatttggtaaattcatggcttgc
tcgggttttcccgaatgtcgccatactcaatcaataaatcaggaattgggactaaaatgc
ccgctttgccagggctctatagtggctttgaaaagcaagaaaggccggactttttatggc
tgcagcaattatcctcagtgtaacttccgctcctgggataaaccaacggggaaaatttgt
ccccattgtggagacgcgatagtagaaaagttcaataaaaagaaagaagctacacagatt
tgccagaatcccgcttgcaagcagaaggtggaaatggggggttga
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