Syntrophomonas wolfei: Swol_1431
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Entry
Swol_1431 CDS
T00396
Name
(GenBank) Holliday junction DNA helicase subunit RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
swo
Syntrophomonas wolfei
Pathway
swo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
swo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Swol_1431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
swo03400
]
Swol_1431
Enzymes [BR:
swo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Swol_1431
DNA repair and recombination proteins [BR:
swo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Swol_1431
RecFOR pathway proteins
Swol_1431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
nSTAND3
AAA_16
AAA_3
NB-ARC
AAA_14
AAA_22
RNA_helicase
Rad17
NTPase_1
AAA_18
MCM
NPHP3_N
AAA_2
AAA_28
Sigma54_activ_2
TsaE
Resolvase
AAA_25
NACHT
AAA_17
ABC_tran
IstB_IS21
DUF815
AAA_24
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
ABI68738
UniProt:
Q0AX16
LinkDB
All DBs
Position
complement(1640899..1641933)
Genome browser
AA seq
344 aa
AA seq
DB search
MLDERLISSHLLDEDDNNENSIRPGRLSEYIGQEKVKENVEVFITAARERKESLDHVLLS
GPPGLGKTTLASIIANEVGKPIRKTSGPAIERPGDLAAILTNLEPGEVLFIDEIHRLNRN
VEEIMYPAMEDYVIDIIIGKGPAARTLRLDLPPFTLIGATTRPGLLSSPLRDRFGISCRL
DFYTPLELSEIILRAARILEISLDKEGATEIAGRSRGTPRVANRLLRRVRDYALVKGNGN
IDFSLAKWALEMLEIDECGLDVMDRMILEAIIGKFSGGPVGLDTLAASVSEESDTISDVY
EPYLLKLGFIQKTPRGRMATEHAYRHLGYPLKGNLEGKGLFSDA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgctggacgagagacttatttcttctcatctactggacgaagatgataacaacgaaaat
tcaatacggcccgggcgcttatccgaatatattggacaggaaaaggtaaaggaaaatgta
gaggtatttatcactgctgcgcgggaacggaaggaaagcttggatcatgtccttctcagc
ggtcccccgggactgggcaagaccactctggccagcataatagccaacgaagtcggcaag
cccattcgcaagacctcgggaccagccattgagagaccgggagacctggcggctattctt
accaatttggaaccgggcgaagttctgtttattgatgaaattcaccggctaaaccgtaat
gtagaagagataatgtacccggctatggaagattacgtcatagatataattatcggcaaa
ggcccggcagcccgcactcttcgcctggaccttccgccatttaccttgattggagctact
acccgacccgggcttttgagttctcccttgcgcgaccgttttggtataagctgccgactg
gatttctataccccgctggagctaagcgagataatccttagggcagcccgaattctggag
attagtctagataaggaaggagccacggaaatagccgggcgttcccggggaacgccgcgg
gtggccaatcgtttgctgcggagagtaagagactacgctttggtcaagggtaatggaaat
attgatttttctctggccaaatgggccttggagatgctggaaatagatgaatgtggattg
gatgtaatggatagaatgattttggaagcaattatcggcaagttcagcgggggaccggta
ggcttggataccctggcggcttcagtttcggaagaatctgataccattagcgatgtttat
gaaccctatctcttaaagctaggctttatccagaagactccccgggggaggatggctact
gagcatgcctaccgtcatctgggctatccgctgaaagggaatttggagggaaaagggctg
ttttcggatgcatag
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