Syntrophomonas wolfei: Swol_1730
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Entry
Swol_1730 CDS
T00396
Name
(GenBank) exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
swo
Syntrophomonas wolfei
Brite
KEGG Orthology (KO) [BR:
swo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
swo03400
]
Swol_1730
DNA repair and recombination proteins [BR:
swo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Swol_1730
Archaeal homologous recombinant proteins
Swol_1730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
ABC_tran
AAA_22
cobW
Motif
Other DBs
NCBI-ProteinID:
ABI69028
UniProt:
Q0AW76
LinkDB
All DBs
Position
complement(1971191..1974862)
Genome browser
AA seq
1223 aa
AA seq
DB search
MKIKQIRFQNLNSLVGEWIIDFSHPAYLSDGIFAITGPTGAGKTTVLDAICLALYGRTPR
LERVNKSSNEIMSRHTGSCYAEISFETREGYYRCHWSQQRARKNPQGELQPHRHEIADAH
SGQILENKIRDVAARVERITGMNFTRFTRSIMLAQGGFAAFLQAPADERAPILEQITGTE
IYSEISRKVHERQREENDRLKILQAEISGIKLLTTEEEEALRQDMQAKIARGKERQEELK
GLQLVLDWLDRMVGWENEIKDIEEQWQQYLKRQQAFQGEAWRLEKARQAMVLDAPYIRLK
DLRDLQKSNLSEIERIREELPRQKEAAGKAAERWENSRQELIELKLLRKSEGETAKKVRE
MDILLKQQGQVIKGMEVAIGTSENECSALQGEITSGVEKAKEMGQALLAIEEYRRKNAQD
AALLANLTGISRVFKRLEELLSTWQQKGLERQRAALALQSLLDARKEIAATHESNKELQR
QQYDVLQAEQDKLEEALQGYEIAWWRDELEQFKEQNDKLQNLGQVWDWMVQLEDNIRNGR
ESIQQLDEQQKRLVWEIEQGEKEAGHLAARIDGLETRVLLLNRIRDLEEERAQLEDGKAC
PLCGATEHPYAQGNIPQMDESQKELNQARKQHKKLSEDLKKKEILRGKLDKEVEHSGAAV
KEAEQQLEKESKLRREGMNELGLDLSVVKTRDELERLANQSRQNIINHSRQLKMIETWQK
NIGTLTLHYEKSRTAFIQSDKELQAAILQQKQADQEDERLQQEYLSLQGELEQLQEETLR
EISPYGMADLPLEQLAAIQKVLDERKKRWEAKEKEKLDLEKAVDKLHNEVEQKRILLKDK
ASALQSERERLKQQQEQYRRQQETRFELYGKRDPDKEEARLDEEIGLAEELVNRTYEDMQ
ELQRHQLRLEEREKTLAVTVQNRAPELQSSEESFTRQLQQAGFEQEEDYRQARLSLEEQQ
ALAQKAEALTKEATELQTRLKDRQEKLQREKEQKLSGEAREVLEEKQRLGEQELIDLREE
IGAARRTLEDSEQSRRRMQTQLQRVEEQKKELQRWQLLHDLIGSADGKKYRNFAQGLSFD
IMIKHANRQLHKMSDRYILLRSQEQPLELNIIDNYQAGEIRSTANLSGGESFLVSLALAL
GLSQMASRKVSVDSLFLDEGFGALDEDVLDTALNTLAGLQQDGKLIGVISHVPALKERIS
TQIEVITQSGGRSILQGPGCQRQ
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgaagattaagcagatacgctttcagaatctaaattccctggtgggggaatggataata
gacttttcccacccggcctatttgtcagatggtatttttgccattaccggacccaccgga
gcgggcaaaaccaccgttcttgacgccatctgcctggccctttacgggcgtaccccgcgc
ctggagcgggtgaacaagagcagcaatgagattatgtcccggcataccggtagttgttat
gctgagataagctttgagacccgggagggttattaccgctgtcattggagccagcagcgg
gcccggaagaatccgcagggagagctgcaaccccacagacatgagatagctgatgctcat
agcgggcaaatcctggaaaacaaaattcgggatgtagccgcccgggtggagcgcattacc
ggcatgaattttacccgctttacccgctccatcatgttggcccaggggggatttgctgcc
ttcctgcaggctccagcggacgagcgcgcccctatactggagcagattaccggaaccgag
atttacagtgaaatatccaggaaggtgcatgaacggcagcgggaggaaaatgatcgtctg
aagatcctgcaggcggaaataagcgggataaagctgctcactaccgaggaagaagaagct
ttgcgccaggacatgcaagctaaaatagcccggggaaaagagcggcaggaagaactaaaa
ggcttgcagttagtcctggactggctggaccgcatggtaggatgggaaaatgaaatcaag
gacatagaggaacaatggcagcaatatttaaaacgacagcaggcttttcagggggaggcc
tggcgtttagagaaggcccggcaagccatggttctggatgctccctatatccggctaaaa
gacctgcgggatttgcagaaaagtaatttaagtgaaatagaacgaatccgggaagaactg
ccccggcagaaggaggccgctggcaaggccgcagaacgctgggaaaacagccgccaggaa
ttaattgagcttaaattattgcgtaaaagtgaaggggaaacggctaaaaaagtacgggaa
atggatatcctgcttaaacagcagggccaggtgattaaaggcatggaagtggctattggt
accagcgagaacgagtgtagcgctttacagggggaaataacgtccggggtagagaaggcg
aaagaaatgggccaggccctgctcgccattgaagaataccggcggaaaaatgcccaggat
gcggccttgcttgctaacctgaccggtattagccgggtttttaagcgcctggaggaactc
ttatcaacctggcagcaaaaggggcttgagcgtcagcgggccgcgcttgctctgcaatcc
ctgctggatgccaggaaagaaatagcggccactcatgaaagcaataaagaactgcaaaga
caacaatatgatgttctgcaggcggagcaggataagctggaagaggctttgcaggggtat
gaaattgcctggtggcgggacgagttggagcaatttaaggagcagaatgataagctgcaa
aacctggggcaggtatgggactggatggttcagctggaggataatataagaaatgggcgg
gaatcaatacaacagttggacgagcaacaaaagcggctggtatgggaaatagagcagggg
gaaaaggaagctggccatttagccgccaggattgatggtttggagacccgggtcttattg
cttaaccgtattcgtgatttggaagaggaacgagctcagctggaagacggcaaagcctgc
cccttgtgcggggctaccgaacatccctacgctcaaggtaacataccccagatggatgaa
agccagaaggagctcaatcaagcccgaaagcagcataagaagctaagtgaggatttaaaa
aagaaggaaatactaaggggcaagttagataaggaagtggaacatagcggcgctgcagtt
aaagaggcagagcaacaactggaaaaagaaagcaaattgcgccgggagggtatgaatgaa
ctgggtttggatttatctgtggtaaagacccgggatgagcttgagcgactggcaaatcag
agtcggcaaaatatcataaaccattcgcggcagcttaagatgatagaaacatggcaaaag
aacatagggaccttgactcttcactatgaaaaaagccgcacagcttttatccaatcggac
aaagaattgcaggcggctatcttgcagcaaaaacaagccgatcaggaggatgagcgcctg
cagcaggaatacctgagcttgcagggtgagctggagcaactgcaagaggaaacccttcgg
gaaataagcccatacggtatggctgatttacctctggagcagctggctgctattcagaag
gtcctggatgaacggaaaaagcgctgggaagctaaagagaaagagaagctggacctggag
aaggcggtggacaaactacataacgaagtggaacagaagcgaatcctgctgaaagataaa
gcctcggctttgcagagtgagcgggagcggctgaagcagcagcaagaacaataccgccgg
cagcaggaaacccgttttgaactatatggcaagcgcgacccggataaagaagaagctcgc
ctggacgaagaaataggcctggctgaggaattggtcaaccggacctatgaagatatgcaa
gagctgcagcgtcaccagctgcgcttggaagagcgggaaaaaaccctggcggttactgta
caaaatcgcgcgccggaactgcaaagttcagaggagagttttacccgacagctacagcag
gccggctttgagcaggaagaggattaccggcaagccagactttctctagaggaacagcag
gccctggcccaaaaagcggaagctttaaccaaggaggccactgaactgcaaactcgcctg
aaggatcggcaggaaaaactgcagcgagaaaaagagcagaaactaagcggagaagcccgg
gaagtactggaggaaaaacagcggctgggtgagcaggagttaattgacctaagggaagaa
atcggagccgccaggagaacactggaagacagtgagcaaagccgccggcgaatgcagacg
cagctgcagcgggtggaggaacaaaagaaggaactgcaacgctggcagctattgcatgat
ctaattggttccgctgatggcaagaaataccgtaatttcgcccagggattgagcttcgat
atcatgatcaagcatgccaatcgccagctgcataagatgagtgaccgctacatattactg
cgcagtcaggagcagcccctggagttaaatatcattgataattaccaggcgggagaaatc
cgctccacggccaacctctccgggggggagagtttcctggtcagcctggccctggccctg
ggactatcccagatggccagccgcaaggtcagcgtggattcattgtttttagacgaaggc
tttggtgctctggatgaagatgttctcgataccgccttgaacaccctggccgggctgcag
caggacggcaagctaatcggcgtaatttctcatgtccccgctttaaaagagcgcatcagc
acccagatagaggttataacccaatccggaggccgcagcatcctgcaaggccccggctgc
cagcgccagtag
DBGET
integrated database retrieval system
