Syntrophomonas wolfei: Swol_1870
Help
Entry
Swol_1870 CDS
T00396
Name
(GenBank) Uracil-DNA glycosylase-like protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
swo
Syntrophomonas wolfei
Pathway
swo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
swo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Swol_1870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
swo03400
]
Swol_1870
Enzymes [BR:
swo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Swol_1870
DNA repair and recombination proteins [BR:
swo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Swol_1870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABI69168
UniProt:
Q0AVT6
LinkDB
All DBs
Position
complement(2132823..2133524)
Genome browser
AA seq
233 aa
AA seq
DB search
MSSEQPSLFELLPGEELYRQEKQVAAKEIRSPFLPGIKVEEAFPGIKEVALLEELARNCN
NCRLRSGCRQVVFSDGDVKSRIMFIGEGPGKDEDEQGRPFVGKAGQLLDKILVAAEIPRS
QVYISNVVKCRPPGNRLPNPDEVRECRNYLEAQIRIMQPAIIVCLGAMASQVVIDPKASV
SKIRGKWFNRQGVKIMATYHPAALLRNPSYKRPAWQDFQMIRDEYNKVKNIPR
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgagttctgaacagccgagtttatttgagctattgccgggtgaggaattatatcgccag
gagaagcaggttgctgctaaagaaatccgctccccattcctgcctgggattaaagtagaa
gaagcatttcccggaattaaggaggtcgctttgctggaggaactggcgcgtaattgcaac
aactgccgcttgcgtagcggttgtcggcaggttgtattcagtgatggggatgtaaagagc
agaataatgtttattggagaaggaccggggaaggatgaagatgaacaggggcgtcctttt
gtgggaaaagccgggcaattgctggataaaatactggtggcggcggaaatcccgcgttcc
caggtttatattagtaatgtggttaaatgccgcccgcccgggaatcgcctgcccaatcct
gatgaagtgagggaatgccggaattatctagaggcgcagataaggataatgcagccggct
attatcgtttgcctgggagcaatggccagtcaggtagtaattgaccctaaagcgagtgtc
tccaaaatccggggcaaatggttcaaccggcagggggttaagattatggctacttaccac
cccgcagccctgctgcgcaatccgtcttataaaagaccggcctggcaggactttcagatg
attagagatgagtataacaaggtgaaaaatatcccccgttag
DBGET
integrated database retrieval system
