Syntrophomonas wolfei: Swol_2017
Help
Entry
Swol_2017 CDS
T00396
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
swo
Syntrophomonas wolfei
Pathway
swo03030
DNA replication
swo03410
Base excision repair
swo03420
Nucleotide excision repair
swo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
swo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Swol_2017
03410 Base excision repair
Swol_2017
03420 Nucleotide excision repair
Swol_2017
03440 Homologous recombination
Swol_2017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
swo03032
]
Swol_2017
03400 DNA repair and recombination proteins [BR:
swo03400
]
Swol_2017
Enzymes [BR:
swo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Swol_2017
DNA replication proteins [BR:
swo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Swol_2017
DNA repair and recombination proteins [BR:
swo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Swol_2017
NER (nucleotide excision repair)
GGR (global genome repair) factors
Swol_2017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
HHH_2
PmbA_TldD_1st
DNA_pol_lambd_f
Imm50
Motif
Other DBs
NCBI-ProteinID:
ABI69312
UniProt:
Q0AVE2
LinkDB
All DBs
Position
complement(2310791..2313391)
Genome browser
AA seq
866 aa
AA seq
DB search
MADKFILIDGNSLLYRAFYALPLLHNSAGVYTNGVYGFLTMFNRVLAEIQPTHIAVAFDK
DRSTFRNELYSEYKANRSAPPEELGGQFQLLRDVLAALNIEYLEMQGYEADDIIGTLSKK
AEEQGLKTVILTGDGDALQLVSEQVEVLLTKKGISEMELYDPQGVKDKWGVEPEKMVEIK
GLMGDASDNIPGVPGVGPKTAMKLVQEFTSLENLYENLPQVKGKKLVEKLEQNREQAFLS
RQLATINRDMELDFSIEDYVMREPHYPELLELYRSLEFNNFLKILQEKEREKGMAPLKQE
IEVLFLEREEDVTALLEEIKQGESVALYFQSSYHHPMWASLQGVFLEYSERVYQLKLEAG
DDYKLQWIKALLESAVIKKYLHNAKFIQVLLLRHGIELRGVAGDTMLLAYVDDPAFEGDE
LDACLKKHLQLNIAENNLAALVNTIRELYFQLEGQIPAELRELLQEVEMPMSEVLARMEF
CGVKVERSTLARISEELASGIAGHEERIFELAGSSFNINSPKQLGKVLFEDLGLRVIKKG
KTGYSTGAEVLEELYQEHEIIAHILNYRQLSKIKSTYADALQELIHPETGRVHTIFKQAQ
TATGRLSSVEPNLQNIPIRMEEGRRIRQAFVAPGPDWLIMAADYSQIDLRSLAHISGDER
LIETFKSGVDIHTRTAVEIFHVPVEWVDSELRRRAKAVNFGIIYGISDFGLARDTGVSRK
EARKYIDNYLNSYPGVKKYMEDIVEFGRRHGYVETLLKRRRYLPELNARNKMVQAFGRRM
ALNTPVQGTSADIIKLAMIKVDEEIRKRRLQARLLLQVHDELLLELPRTELEEVSGLLRD
CMENACSLKVPLEVSLKTGPNWYEME
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaatttatactcatagatggaaacagtctgttgtaccgggctttttatgct
ctgccgctgctgcataattccgccggggtttacaccaatggggtatacggtttcctgacc
atgttcaaccgggtgctggctgagattcagcctacgcatattgccgtagcttttgataaa
gatcgcagtacctttcgtaatgagctgtatagcgaatacaaagccaatcgttcggctcct
ccggaggaattggggggacaattccagctgctgcgtgatgttctggcagctttgaatata
gagtacctggagatgcagggttatgaagcggacgatataatcggtactttgagcaaaaag
gcggaagaacaagggttaaagaccgtcattctaaccggtgacggtgatgccctgcagctg
gtttcggaacaggttgaggttttgctgaccaaaaaaggcataagtgagatggaactctat
gatccccagggggtcaaagacaagtggggagtagagccggaaaagatggtggaaataaag
ggccttatgggggatgcttccgataacatccccggggttcccggggtaggcccgaagact
gccatgaagctagtgcaggaatttaccagcctggagaatctctatgagaatttgccgcaa
gtcaaaggcaagaagctcgtggaaaagctggagcagaaccgggagcaggcttttctcagc
cggcagctggccaccattaaccgcgatatggagttggatttttcgatagaggactatgta
atgcgggaaccccattacccggaactgttggagctgtaccgcagcctggaattcaataat
ttcctgaaaatcctgcaggagaaagagcgggagaagggaatggccccgctaaagcaggag
atagaagtactgttcttggaaagagaagaagatgtgacagctttactggaagaaataaag
caaggggagagcgtggccctgtacttccagagcagttaccatcatcctatgtgggctagt
ctgcagggcgttttcctggaatacagcgagcgggtttaccagctgaaactggaagctggg
gatgattataaactgcagtggataaaagctttactggagtcggcagtgattaagaagtat
ctgcataacgccaaattcatccaggttttgctactaagacacggaattgagctcagggga
gttgcgggggataccatgctgttggcctatgtagatgatccggcttttgagggtgatgaa
ctggatgcctgccttaagaaacacctgcagcttaacatagcggaaaataacctggcggca
ttggtcaacacgataagagaactctatttccagctggaggggcaaatcccggcggaactg
cgggagcttttgcaagaggtagagatgcccatgtcggaagtactggcccggatggaattt
tgcggggtgaaggtggagcggagtaccctggcccggatttctgaggaactggccagtggg
atagccggccatgaggaacggattttcgagctggcgggaagcagttttaacataaattca
cccaaacaattgggtaaagtgctttttgaggatttgggtcttagagtaataaagaagggt
aaaaccggttattccaccggggcggaagtcctggaggaactctaccaggagcatgagata
atagctcacattttaaattatcgccagctcagcaaaataaaatctacctatgctgatgct
ttgcaggagttgatacacccggaaaccggccgggtacataccatatttaaacaagcccag
actgcaaccggacgcctgtccagcgtggagcccaacctgcagaacatccctatcagaatg
gaagaaggacgccggattcgccaggccttcgtggctccgggtccggattggcttattatg
gcggcggactattcccagattgacctgcgctccctggcccatatcagcggggacgagcga
ttgattgaaacctttaaaagcggggtggatattcacacgcggacagcggtggaaatcttt
catgtgccggtggaatgggtggatagcgagctgaggagaagggccaaggcggtcaatttc
ggcataatatatggtatcagtgattttggcctggcccgggacaccggggtcagtcgtaaa
gaagcccgtaaatatatcgacaattaccttaacagctatcccggcgtaaaaaaatatatg
gaagatatagtggagtttggacgccgccacggttatgttgagactttgctgaaacgccgc
cgttacttgcccgaactcaatgccaggaataagatggtgcaggcctttggccgccgtatg
gctcttaataccccggtgcagggaacttctgctgatataatcaaactagctatgatcaag
gtggatgaagagataaggaagcgccggcttcaggctcgcttgctattgcaggtgcatgat
gaactgcttctggaactgcctcggacggaactggaagaagtgagcggactcttacgggac
tgtatggagaacgcctgcagcttgaaagtacccttggaagtatcccttaagaccggtcct
aactggtatgagatggagtag
DBGET
integrated database retrieval system
