Syntrophomonas wolfei: Swol_2043
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Entry
Swol_2043 CDS
T00396
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
swo
Syntrophomonas wolfei
Pathway
swo03030
DNA replication
swo03430
Mismatch repair
swo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
swo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Swol_2043
03430 Mismatch repair
Swol_2043
03440 Homologous recombination
Swol_2043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
swo03032
]
Swol_2043
03400 DNA repair and recombination proteins [BR:
swo03400
]
Swol_2043
Enzymes [BR:
swo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Swol_2043
DNA replication proteins [BR:
swo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Swol_2043
DNA repair and recombination proteins [BR:
swo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Swol_2043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ABI69337
UniProt:
Q0AVB7
LinkDB
All DBs
Position
complement(2340542..2343934)
Genome browser
AA seq
1130 aa
AA seq
DB search
MPGSFVHLHNHSEYSLLDGACRIKDLVNRAVELEMPAVAITDHGVLYGVIDFYREARKRG
IKPLIGCELYVAPRSRLDKEARIDDNLYHLTLLCKNELGYRNLVQLVSRAFLEGFYYKPR
VDQELLEKYHEGLIALSGCVVGEIPRLLQNGDYRGAREKALYYQELFGSGNFYLELQDHG
LQEEKASLPGLLRLSREDSIPLAASNDCHYLRKKDAQVHDVLLCIQTGSVVNDEKRLRFS
GSEFYMKSREEMAALFPDYPEALENTLKIAGECNLDFTFGEYHLPVFELPPGHSAESFLS
EMVHEKFRRKYPDAQEKIIERLEYELRVINEMGFAAYFLIVQDLVNWSRQNGIPVGPGRG
SAAGSLVSYVLDITTIDPLRYDLLFERFLNPERVSMPDIDIDFCFEKRDRVIDYIISKYG
ADRVAQIITFGTMAARAAIRDVGRALDVPYGQVDRIAKMVPAELGVSLERALEISPDLFT
AYQSDYNTRNILDIAQAIEGMPRHASIHAAGVVIGRQSLSEILPLQKTPEGHVLTQFTKE
TVEDIGLLKMDILGLRTLTVIDRALEIIRKTRDEDIDISSIPLDDEAVYKLLSAGDTAGV
FQLESDGLRRLLCEMKPDRFEDIIAVIALYRPGPLGSGMVEDFINRKNGRQEIEYIDPLL
EDILKETYGVILYQEQVMRVASELADFTMGEADVLRRAMGKKKAEELMAQRDKFIAGAAR
NGIGLATASHLFDLMESFAGYGFNKSHSAAYALISYQTAYLKAHYPVEYLCAFLSSVIDN
QDKVVSYIKECRRLGIKVLPPDINESYENFSVARDAIRFGLGAIKNVGQNAVKNIVEARK
QGFYTSLFDFCRRVDLGQLNKRMLENLILAGCFDSLGFSRKGALSIMEECVNISLAIKQN
ECSQQGSLFGDEMEMVEEPIIKLKGEYESRERLLKEKEVLGFFVSESPLDEFRSLLPLIS
THCLEDINLWEEESYVRVAGIVVNLSRRVSRKGESYARFVLEDLGGRIEVLVFPSAYRKN
GDRLEADRAVIVEGYFDRREEQPKIALRKTGPIPESLREMHLRLAGNGDGEMDRNKLVKL
LQKYPGDIEVFLHLPGRRLLVLNEKFNVSPSQDLKQELAAVYGPQNVWFN
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgccgggtagttttgttcacttacataatcattccgaatacagtcttctggacggagcc
tgccgcatcaaggacctggtaaaccgggctgtggaactggagatgccggcggtggccata
accgaccatggggtgctctatggggtaatcgatttttaccgcgaggcccgcaaaagggga
atcaagcccttgatcggctgtgagctctatgtggccccgcgcagccgtctggacaaggaa
gcccgtatcgatgataatctttatcacctgactctgctctgcaagaatgagctgggttac
aggaacctggtacagctggtgagccgggctttcctggaaggtttttattacaagccccgg
gtggatcaggagctcctggaaaaataccatgagggtttaatcgccctctccggttgtgtg
gtcggggagataccccgcctgctgcagaacggtgattaccggggagcccgggaaaaagcc
ctttattaccaggaactatttggttctgggaatttttacctggagttgcaggatcatggt
ttacaggaggaaaaggcaagcttgcccggcctgcttcgtctcagccgggaagatagtatt
cccctggcggccagcaatgactgccattacctgaggaaaaaagacgctcaggtacatgat
gtgcttctatgtattcaaaccggctccgtggtaaacgatgaaaaacgcctgcgcttttcg
ggcagcgaattttatatgaaaagccgggaggaaatggccgcgcttttcccggattacccg
gaagcattggagaacacgctgaagattgccggcgagtgcaatctcgatttcacttttggc
gaataccatttacccgtatttgagttgccgcctggacacagtgcagagtctttccttagt
gaaatggtacatgagaagttccgccgcaaataccctgatgcgcaggagaagataatcgag
cggctggaatatgagttaagggtaataaatgaaatgggctttgccgcctattttcttatt
gtacaggatttggtcaactggtcccggcaaaacgggattccggtagggccgggaaggggc
tcggccgcaggaagcctggtttcttatgtgctggatattaccactatcgatcccttgcgt
tatgacctgctttttgaacgattcctcaacccggaaagggtgagcatgccagatatcgat
atagatttttgctttgaaaagcgggaccgggtaatagattacatcataagcaaatacggg
gctgaccgggtggcccagattataactttcgggactatggcggcccgcgccgctattcgg
gatgtgggacgggccctggatgtaccttatgggcaggttgaccgtatagctaaaatggtg
ccggctgaactgggggtgagcctagaacgggccctggagatttcgccggatctttttacg
gcttaccagagtgattacaatacccgcaacatactggatattgcccaggctatcgaaggt
atgccgcgtcatgcatcgattcatgctgccggagtggttatcggccggcagagtttaagc
gagattcttcccctgcaaaagaccccggagggccatgtgctaacccagtttaccaaggag
acggtagaggatatcgggctactaaaaatggacatattgggtttgcgcacccttaccgtg
atagaccgggctctggagataatcaggaagacccgggacgaggatattgatattagcagc
attcccctggatgacgaagcggtttacaaactgctgtccgccggggatacggctggagtc
tttcaattggagagcgatggcttgcgccgcctgctctgcgagatgaagcccgaccgcttt
gaggatattatcgcggtaattgcgctttaccgcccgggtcccctgggcagtggcatggtg
gaggattttatcaaccggaaaaacggccgtcaggagatagagtatatcgaccccttactg
gaggatatactgaaggaaacctatggggtcattctctaccaggagcaggtgatgcgggtg
gccagtgagctggccgattttaccatgggtgaagccgatgttttgcggcgggccatgggc
aaaaagaaggcggaggaattgatggcccagcgggataaattcatagccggagcagcccgg
aatggtattggcctggccaccgccagccatctctttgatcttatggaaagctttgccggc
tatggttttaacaaaagccactcagccgcctacgccctgatttcctaccagaccgcttac
ctaaaagcccattacccggtagaatacctgtgcgcttttttgagcagtgtaatagataat
caggataaagtagtttcctatattaaagaatgccggaggctagggataaaggtactgccc
ccggacattaacgaaagttatgagaactttagcgtggcccgggatgccattcgctttggc
ctgggggcgataaagaatgtagggcagaatgcggtgaaaaacatcgtagaggcgcgaaaa
caggggttctatacctccctttttgacttctgccgccgggtggatctggggcaattgaac
aagcgtatgctggaaaaccttatattggccggttgttttgactcgctgggttttagccgc
aaaggggccttatccattatggaggaatgcgtcaatatctctctggcgataaaacaaaat
gaatgcagccaacaaggctctcttttcggggatgaaatggagatggtggaagagccgatt
ataaagctgaagggcgaatatgaatcccgggaacggctgttaaaagagaaagaggtactg
ggcttttttgtttctgagagtcccctggatgaattccgctctctgttacccctgatcagt
acccattgtttggaagatattaacctttgggaagaagaatcctatgttcgcgtggcgggg
atagtggtgaatttaagccgccgggtcagccgcaaaggggagagttatgctcgctttgtc
ctggaggatctgggggggaggatcgaagtgctggttttcccttcggcctaccggaagaat
ggtgatcgtctggaggcggaccgggcggtaattgttgaaggctacttcgaccggcgtgag
gaacagcccaaaatagccttgcggaaaacgggccccataccggagtcgttgcgggaaatg
catcttcgcctggccgggaatggcgatggcgaaatggatagaaataagctggtaaaactt
ttgcaaaaatacccgggggatattgaagtctttttgcacctgccgggacgccgcctgctg
gtcttaaatgaaaaattcaatgtttctcccagccaggatttgaagcaggaattggcggcc
gtttacggtccgcagaatgtctggttcaattag
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