Syntrophomonas wolfei: Swol_2085
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Entry
Swol_2085 CDS
T00396
Name
(GenBank) Exodeoxyribonuclease V
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
swo
Syntrophomonas wolfei
Pathway
swo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
swo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Swol_2085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
swo03400
]
Swol_2085
Enzymes [BR:
swo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Swol_2085
DNA repair and recombination proteins [BR:
swo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Swol_2085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
Viral_helicase1
HHH_5
AAA_11
AAA_22
AAA_28
HHH
PhoH
AAA_29
Helicase_RecD
SLFN-g3_helicase
nSTAND3
T2SSE
HHH_2
UvrD_C
PIF1
AAA_16
AAA
AAA_23
NTPase_1
Mg_chelatase
RsgA_GTPase
UvrD-helicase
ABC_tran
ABC_ATPase
HHH_3
RuvB_N
NPHP3_N
AAA_12
TsaE
NB-ARC
CbiA
Motif
Other DBs
NCBI-ProteinID:
ABI69377
UniProt:
Q0AV77
LinkDB
All DBs
Position
complement(2398005..2400203)
Genome browser
AA seq
732 aa
AA seq
DB search
METIYGYLERISYCNEETNFVVAKLKEKGKRELSSIVGKMVGVNPGESLQLTGRWLHNPK
FGLQFQVESYETIVPATVRGMEKYLGSGLIKGIGPVMAKRIVQRFGVEALDIIENQPDRL
QEVNGIGPKRVEMITQAWEEQREVKEIMIFLQGHGVAASYAAKIYQRYEKEAIQVVRENP
YRLAAEVRGIGFLTADRIAQQLGIDPNSLLRAREGIIFVLNQYMNDGHVYCPRALLLEKA
EEALQITAEVVEQALEELLRERRLVAETMMGTGADGEAETTAIYLMPFFIAELQSARLLL
ALQEEKSVVRPIDVEKAVDWVGQKLKIKLAARQKEAVATAVSEKIMIITGGPGTGKTTIV
NAITRIFAALKLKITMAAPTGRAARRLRESTGLEAMTIHRLLEFSPREGGFARNRENPLN
TDVVIVDESSMIDSLLMYNLLKAIPPQAILILVGDVNQLPSVGPGNVLRDLIESGRFPVI
ELTDIFRQARGSRIVYNAHRINQGKFPFLPEGGEESDFYFMEEKDAEKAMQKILGLCRSH
IPRYFNFHPIRDIQVLTPMNRGLIGVSNLNVELQQVLNPKQPGISRGGRNFKIGDKVMQL
VNNYDKGVYNGDIGWVKRFDQEEQELEVEFEDYPVSYDFSQLDELQLAYACSIHKAQGSE
YPAVIIPLLEQHYILLQRNLLYTGVTRARKLVIIIGSKKALHIAINNDKPRSRDTGLKER
LVKMGVQEIAQQ
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccatctatggatatttggaaaggataagctattgtaacgaagagaccaacttt
gtggtggctaaactcaaagaaaaagggaaacgcgagttgagctccatagtgggcaaaatg
gtaggggtaaaccctggagaatccctgcaactaacggggagatggctgcataaccccaaa
ttcggtctgcaatttcaggttgagtcctatgaaaccatagtaccggccacggtacgggga
atggaaaaatacctgggttccgggcttatcaagggaataggaccggttatggccaaaaga
atagtgcagcgctttggggtagaggccctggatatcattgagaaccagccagaccgcctg
caggaagtcaacggaatcggacccaagcgggtggagatgattacccaagcctgggaagag
cagagagaagtaaaagaaatcatgatatttctgcaagggcatggggtagccgcttcctat
gccgctaaaatataccagcgttacgagaaagaggccatccaggtagtaagggaaaaccct
tatcgcctggctgcggaggttcgaggcatcggctttttgaccgccgaccgcatagcccag
caattaggaattgaccccaattcgttgctgcgggccagggaagggataatatttgtttta
aaccagtatatgaacgatgggcatgtgtattgcccccgggccttgctgctggagaaggcg
gaagaagctttgcaaatcactgctgaagtggtggagcaggctctggaggaattgctgcgt
gagcgccgcctggtagctgagactatgatgggtacgggagcagatggcgaagctgaaacc
acggctatttacttgatgcccttttttattgccgagctgcagagtgctcgtttactcctc
gctttacaggaagaaaagagcgtagttcgtcccattgatgtggaaaaggccgtggattgg
gtgggccaaaaacttaagattaagctggcagccaggcaaaaagaagccgtagctactgcg
gtaagtgaaaagataatgattattaccgggggaccggggaccggcaaaaccacgatagtt
aatgccatcacccgtatatttgcggccttaaagcttaagattaccatggcggctcccacc
ggacgggcggcccgtcgcctgcgggaaagcaccggtttggaagctatgaccattcaccgc
ttgctggaattcagccctcgtgaggggggctttgcccggaaccgggagaaccccttgaat
acggatgtggtaattgtcgatgaaagctctatgattgacagcctgcttatgtacaacctc
ttgaaagctattccgccgcaggccattttgatactggtaggggatgtgaaccagcttcct
tcagtaggtccgggcaatgtactgcgggatctgatcgaatcgggaagattcccggttata
gaattaaccgatattttccgccaggcacgaggaagccggatagtctataatgcccaccgt
atcaaccagggcaaatttcctttcctgccggagggcggggaggaaagtgatttttatttt
atggaggaaaaagatgcggaaaaagctatgcagaaaatcctgggtctctgccgcagccat
attccccgttatttcaattttcaccccattagggatattcaggttctgactcccatgaac
cggggacttattggggtcagtaatttaaatgtggagttgcagcaggtgctcaaccccaag
cagccaggaataagccggggtggaaggaattttaaaatcggtgacaaggttatgcagctg
gtcaataattacgataaaggcgtatacaacggcgatattggttgggtaaaacgctttgac
caggaagaacaggaattggaagttgaatttgaagactatccggtctcttatgacttttcg
cagcttgatgagctgcaactggcctatgcttgttccattcacaaggcgcagggcagtgaa
tacccggcagtgattattccgcttttggaacagcactatatactcctgcagcgtaacctg
ctttacaccggggttactcgggctcgcaaactggtaataataataggaagcaaaaaagct
ttacacatcgccataaacaacgacaaaccccgcagtcgggataccgggctgaaagagcgc
ctggtgaagatgggggttcaggagatagcacagcaatag
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integrated database retrieval system
