Shewanella piezotolerans: swp_0008
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Entry
swp_0008 CDS
T00791
Name
(GenBank) Site-specific DNA-methyltransferase (cytosine-specific)
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
swp
Shewanella piezotolerans
Pathway
swp00270
Cysteine and methionine metabolism
swp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
swp_0008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
swp03000
]
swp_0008
03032 DNA replication proteins [BR:
swp03032
]
swp_0008
03036 Chromosome and associated proteins [BR:
swp03036
]
swp_0008
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
swp02048
]
swp_0008
Enzymes [BR:
swp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
swp_0008
Transcription factors [BR:
swp03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
swp_0008
DNA replication proteins [BR:
swp03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
swp_0008
Chromosome and associated proteins [BR:
swp03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
swp_0008
Prokaryotic defense system [BR:
swp02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
swp_0008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Cons_hypoth95
HTH_17
ACT_ACR9_C
Motif
Other DBs
NCBI-ProteinID:
ACJ26856
UniProt:
B8CH64
LinkDB
All DBs
Position
complement(6364..7602)
Genome browser
AA seq
412 aa
AA seq
DB search
MLDDQPPKINSFSPEVLADLLSVPKRTIEARIKKGELKPDPETGLISKCQVKHLEEVISM
EQSTWDTDLQVKCKRDYTLVELFAGGGGLALGMEQAGLESIFLNEMDKHACKTLRHNRPD
WNVVEGDISKIDFSVIKQDVDVLTGGFPCQAFSYAGKSLGLDDTRGTLFYEMAKAIKELQ
PKVFLAENVRALLTHENGETLAIIKNVFEELGYVLEEPRVLKAIFYKVPQKRERLILVGV
RKDLATSAKFSWPSPYKRIMTLKDAFEKGELFDSKVEESPGQEYPQRKKEIMAQVPPGGY
WRDLKPELQKEYMKGSYFLGGGKTGMARRLSMNEPSLTLTTSPAQKQTERCHPVETRPLQ
IREYARIQTFPDNWEFQGSLTAQYKQIGNAVPVNMAAALGRSLAKFLNQIES
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatgatcagcctcccaaaataaatagcttttcccctgaagttcttgcggactta
ctatccgtaccaaagaggactatagaagcacggataaagaagggagaactgaaacctgat
ccagaaactggacttataagtaagtgccaagtaaagcacttagaagaagttattagtatg
gagcagtcaacttgggatactgatttacaagtaaaatgcaaacgtgactacactcttgtt
gaactattcgccggtggtggtgggttagctctagggatggagcaagctggtttagaaagc
attttcttaaatgaaatggataaacatgcctgcaagactcttcgacataacagacctgat
tggaatgttgttgaaggtgatatatcaaagatagacttttctgttattaaacaagatgtt
gatgttctaactggaggatttccttgccaagcattctcttatgcagggaaaagcctagga
ttagatgatacacgaggaacacttttctatgaaatggccaaagctatcaaagagcttcaa
cctaaagtatttttagctgaaaatgttcgggcgctcttaactcatgaaaatggagaaaca
ctcgccatcataaaaaatgtttttgaagagttaggttacgtactagaagagcctcgcgta
ttaaaagcaatcttttataaagtacctcaaaaacgtgaacgactaattttagtcggagtt
cgcaaagatctagctacatcagcaaaatttagttggccatccccatataaaaggattatg
actcttaaagatgcctttgaaaaaggagagctttttgatagcaaagtagaagaatcacct
ggtcaagaataccctcagcgcaaaaaagaaataatggctcaggttcctccaggaggttac
tggcgagacttgaaacctgaactacaaaaagaatatatgaagggtagctactttctaggt
ggtggtaaaacaggtatggcaaggcgcttatcaatgaatgaacctagtttaaccctaact
acgtcgccagcccaaaagcaaactgaacgatgccatccagtagaaacaagaccattacag
attcgagagtatgcccgtattcaaacttttcctgataactgggagtttcaaggttcctta
actgcacaatacaagcaaattggcaacgctgtacctgttaatatggcggcagcattaggg
cggtctttagctaaatttttaaatcaaatagaaagttaa
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