Shewanella piezotolerans: swp_0011
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Entry
swp_0011 CDS
T00791
Name
(GenBank) tRNA modification GTPase TrmE:Small GTP-binding protein domain:GTP-binding
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
swp
Shewanella piezotolerans
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
swp03016
]
swp_0011
Transfer RNA biogenesis [BR:
swp03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
swp_0011
Prokaryotic type
Methyltransferases
swp_0011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
AIG1
Dynamin_N
Ras
ABC_tran
Gtr1_RagA
AAA_28
Roc
Arf
SRPRB
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ACJ26859
UniProt:
B8CH67
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All DBs
Position
complement(11931..13292)
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AA seq
453 aa
AA seq
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MTTDTIVAQATAPGRGGVGIIRVSGDLASNVAMAVLGHIPKTRYADYCDFKDEQGGVIDQ
GIALYFKGPNSFTGEDVLELQGHGGQIVLDMLIKRVMETEGLRIAKPGEFSEQAFMNDKL
DLTQAEAIADLIDATSEQAAKSALNSLQGEFSTQVHELVEQVTNLRLYVEAAIDFPDEEV
DFLSDGKISGSLNRIITKLDTVQASAKQGSIIREGMKVVIAGRPNAGKSSLLNALAGKES
AIVTEIAGTTRDVLREHIHLDGMPLHIIDTAGLRDTADTVEKIGIERAWDEIKTADQVLF
MVDGTTTNAVDPHEIWPDFIDRLPKNLGVTVVRNKADLTGETLEITEEAGHPVHRISAKT
GLGVPALQQHLKSLMGYQSNLEGGFIARRRHLEALDLASSHLDLGREQLEVYQAGELLAE
ELRMAQLALSEITGKFTSDDLLGKIFSSFCIGK
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagatactatcgtggcacaagcgaccgctccagggcgtggcggtgtaggtatt
attcgcgtatctggcgacttagcgagcaatgtagctatggcggtacttggccacatccct
aaaacccgttatgccgattactgtgactttaaagatgaacaaggcggcgttatcgaccaa
ggtatcgcactgtactttaaaggccctaactcatttaccggtgaagatgtacttgaactg
caaggtcatggcggacaaatcgtacttgatatgcttattaagcgcgtgatggaaactgaa
ggcctgcgtatcgctaaaccaggagagttcagcgaacaggcttttatgaacgataagctc
gacctaacgcaagcagaggcgattgccgaccttattgatgcaaccagtgaacaagccgct
aaaagcgcgttaaactcgcttcagggggaattctcgacccaagtacatgaacttgtcgaa
caggtcactaacctgcgcttatacgtcgaagcagccattgatttccctgatgaagaggtc
gacttcctttctgacggtaaaatatcaggctcactcaaccgtatcatcactaaactcgat
actgtgcaagccagtgctaaacaaggctctatcattcgtgaagggatgaaagtggtgatt
gctggccgtccaaatgcagggaaatccagcttactaaacgccctcgccggtaaagagtct
gctattgtgactgaaatagccggtaccacccgcgatgttctgcgtgagcatattcactta
gatggtatgccactgcatattatcgataccgctgggctacgagataccgctgatactgtt
gagaagataggtatagagcgtgcctgggacgagatcaaaacggctgatcaggtactgttt
atggttgatggcaccacgactaatgcagttgatccacacgaaatttggcctgactttatt
gatcgcttacctaaaaatctaggcgttaccgtggtgcgtaacaaagccgatcttaccggt
gaaacattggagatcaccgaagaggcgggccatccagttcaccgtatatcagccaaaaca
ggtttaggtgtaccagcgctacaacagcacctaaaatcattaatgggttaccaaagtaat
ctagaaggtggttttattgcccgtcgacgtcatttagaagcgctcgatctggcaagcagc
catttagatttaggcagagagcaactagaagtttaccaagcgggtgaattactcgcagaa
gagctaagaatggcgcaactggcgttgtcggaaattaccggaaaattcacctcagatgac
ctactcggaaaaatcttcagctctttctgtatcggtaaatag
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