Shewanella piezotolerans: swp_0089
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Entry
swp_0089 CDS
T00791
Name
(GenBank) Vibrioferrin biosynthesis protein PvsE
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
swp
Shewanella piezotolerans
Pathway
swp00300
Lysine biosynthesis
swp00470
D-Amino acid metabolism
swp01100
Metabolic pathways
swp01110
Biosynthesis of secondary metabolites
swp01120
Microbial metabolism in diverse environments
swp01230
Biosynthesis of amino acids
Module
swp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
swp_0089
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
swp_0089
Enzymes [BR:
swp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
swp_0089
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ACJ26934
UniProt:
B8CGU1
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All DBs
Position
98451..99689
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AA seq
412 aa
AA seq
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MQKIVNAIANLAAEQDPQAPLCAYIYDLEQLKNHASAMMAALPSNCQLYYAAKANPEAEV
LQVLAPIVDGVEAASGGELNWIHQCQPQVPLIFGGPGKLVSELSQAIDLDVDAIHVESLT
ELQRITALCRQKQRHCRILLRMNISLEGIAETRLTMGGKPTPFGIDAAELDTAMAIVRDI
PTLAGKPLVELLGFHFHLMSHQLDVGRHLALMKLYFSTYKKWCQKYSLNLPMLNVGGGIG
VNYSDPQQIFDWKHFCMELETLIKQNQMEAVNIRFECGRFVTAAMGYYVMQVLDIKKNHG
QWFAIGHGGTHHFRTPAAQAHDHPFFVLAAKDIGIELEQAETKITTTNLKSELVTIVGQL
CTPKDVLATQQYVERLAVDDYLVFSHAGAYAWNISHQNFLMHAPPQRFFIRE
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaattgttaatgccattgccaatttagccgcggagcaagatccacaagcgcca
ctgtgtgcctatatttatgatcttgagcaactaaaaaatcatgcaagtgcaatgatggcc
gcgctgccgagtaactgtcagctgtattatgccgccaaggctaaccctgaagccgaagtg
ctacaggtactggcgccgatagttgatggcgttgaagccgcttcaggaggtgaacttaac
tggatccaccaatgccaaccacaagtcccattgatctttggtgggcccggaaagttagtc
tctgagttatcccaagcgattgatctcgatgttgatgctattcatgttgaaagcttaact
gagctacagcggatcaccgcgttatgcagacaaaagcagcgtcattgccgcattctattg
cggatgaatatctctttagaagggatagctgaaacgcggctgacgatgggaggcaagcca
actccttttggtattgatgctgctgaacttgataccgcaatggccattgtgagagatatc
cccacattagcaggtaagccgctggtggaactgctgggttttcactttcatcttatgtca
catcagctcgatgttgggcgacatctggcgttaatgaagttgtatttttcgacctacaaa
aaatggtgtcagaaatacagtttgaatctgcccatgttgaatgtcggtggtgggattggt
gttaactatagcgatccgcagcagatattcgactggaagcacttttgtatggagctggag
actttaattaagcaaaatcagatggaagcggtgaatattcgctttgagtgtggtcgattt
gtgacggctgccatgggctactatgttatgcaggtactggatatcaaaaaaaatcatggt
caatggtttgccatcggccacggcggcacccaccactttagaacgcctgcggcgcaagct
cacgaccatcccttttttgtgttagcagcaaaagacattggcatcgagttggaacaagct
gaaactaagattaccacgactaacctcaagtcggaattagtcaccatagttgggcagtta
tgcactccaaaagatgtgttggcgacgcagcaatatgtggagcggcttgctgtggatgat
tacttggtattctcccatgcgggggcatatgcatggaatatttcgcatcagaatttctta
atgcacgctccaccacagcggttttttatcagagaataa
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