Shewanella piezotolerans: swp_0114
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Entry
swp_0114 CDS
T00791
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
swp
Shewanella piezotolerans
Pathway
swp00061
Fatty acid biosynthesis
swp00071
Fatty acid degradation
swp01100
Metabolic pathways
swp01212
Fatty acid metabolism
swp02024
Quorum sensing
swp04146
Peroxisome
Module
swp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
swp_0114
00071 Fatty acid degradation
swp_0114
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
swp_0114
09145 Cellular community - prokaryotes
02024 Quorum sensing
swp_0114
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
swp01004
]
swp_0114
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
swp04147
]
swp_0114
Enzymes [BR:
swp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
swp_0114
Lipid biosynthesis proteins [BR:
swp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
swp_0114
Exosome [BR:
swp04147
]
Exosomal proteins
Exosomal proteins of breast milk
swp_0114
Exosomal proteins of breast cancer cells
swp_0114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ACJ26958
UniProt:
B8CGW5
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All DBs
Position
122284..123993
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AA seq
569 aa
AA seq
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MAAPWHQVSWSNFDIITSKIARLLIQFGIESQDRAVILSQNCPQWTCADLGLLKAKAVVV
PIYPTSTLEQAAYIVNDAQAKLIFAGDAEQYAMACDLVAKCDSLSRVVVFDKSVPLQDTV
NHFYLDELLERELDKVADAELEKRLAATSLDDLLTLIYTSGTTGDPKGVMLDYRNIASMV
RQHDTLLPFTPGDVSLAFLPLSHVFERGWSFYVLCRGGHNVYLSNPMAVKEAIVQIRPHT
LCVVPRFLEKVYSAVQDKVIKAPEMRQKMFTWAMSVGHKQSEVGQGRHKASLGLSLQWKL
ADKLVFSKLKQVLGGRLKFMPCGGAALDPNVSAFFQSIDVPVLCGYGMTETTATATCNTL
ANRVPGSNGQVLPEVEIKLGKDNEILVRGDTVMRGYYNRPQETADTFEDGWLKTGDAGRI
DEQGNLFITDRIKELMKTSNGKYVAPQRVEGKVGCCPFIEQVAIVADARNYVTALIVPAF
ESLESWAKEKGVNYESQLDLLRHAHVVEHFEQRLKMLQSELAGFEKIKKFTLLPDAFSME
AGLITPTMKLRRKVIYNKYALEIDKMYAR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgccttggcatcaagtgagctggagcaactttgatattatcacctctaaaatt
gcacggctgttaattcagtttggcattgaatcccaagaccgcgctgtgatcctttcacag
aactgtccgcagtggacttgtgctgatttaggcttattaaaggctaaagcggttgttgta
cctatctatccaaccagcactttagaacaagctgcttacattgttaacgatgcacaagca
aagctgatttttgctggcgacgcagaacagtacgctatggcatgcgacttggttgccaaa
tgcgactctttatcgcgtgtagtggtatttgataaaagcgtaccgcttcaagatacagtt
aatcatttctacttagacgagctgcttgagcgtgaactcgataaggtggccgatgccgag
ctggaaaaaaggctcgcggcgactagccttgatgatctattaacacttatctacacctct
ggtaccacaggcgatccaaaaggggtcatgctggactaccgcaacatcgcatctatggtg
cgccagcatgatactttgctaccttttacaccaggtgatgtgtcattagcctttttgcca
ctgagccatgtatttgagcgtggctggagcttttacgtattgtgccgcggtggccataac
gtgtatctgtctaacccaatggctgtgaaagaggcgattgtccagatccgtccacatact
ttatgcgtggtgccgcgtttcttagagaaggtgtatagcgcagtccaagacaaagtgatt
aaagccccagagatgagacagaaaatgttcacctgggcgatgtctgttggtcataagcaa
tctgaagtgggtcaagggcgtcacaaggcgtcactagggctgagccttcagtggaaactg
gctgataagctggttttcagtaaattgaaacaggtcttaggtggccgccttaagtttatg
ccttgcggtggtgcagcacttgatccaaacgtaagtgcattcttccaaagtatcgatgta
ccggttttgtgtggttatggcatgacggaaaccactgcaacagcaacctgtaatacttta
gctaaccgtgtacctggttcaaacggtcaagtattgccagaagttgaaataaaacttggt
aaagataacgaaatcttagtccgcggcgatactgttatgcgcggttactacaatcgtccg
caagaaacggcagatacttttgaagatggctggttaaaaaccggtgatgcaggccgcatt
gatgagcagggtaatctgtttatcactgaccgaattaaagaactgatgaagacctcaaac
ggcaagtacgttgcaccgcagcgtgttgaaggtaaagtcggctgctgtccattcattgag
caagttgccattgttgctgatgcacgtaactacgtcaccgcattgattgttcccgcattc
gagtcattagaatcttgggcaaaagagaagggtgtaaactacgaatcacaactcgatttg
ttacgtcacgctcatgtggttgagcactttgagcagcgactaaagatgttgcaatctgaa
ttagctggcttcgagaaaatcaaaaagtttaccctacttcccgatgccttttcgatggaa
gcgggtttaattacgccgacaatgaagttgcgccgtaaggtcatttacaacaagtatgct
cttgaaatcgataagatgtatgctcgttaa
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