Shewanella piezotolerans: swp_0143
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Entry
swp_0143 CDS
T00791
Name
(GenBank) MscS Mechanosensitive ion channel
KO
K16053
miniconductance mechanosensitive channel
Organism
swp
Shewanella piezotolerans
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swp02000
]
swp_0143
Transporters [BR:
swp02000
]
Other transporters
Pores ion channels [TC:
1
]
swp_0143
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Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
DUF3007
Motif
Other DBs
NCBI-ProteinID:
ACJ26987
UniProt:
B8CGZ4
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Position
149509..150765
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AA seq
418 aa
AA seq
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MDQELRASITQWLATVGIDSQPADGVSTSILVIVCFIVAFIGYIFVKRGVVSTMNMVITR
SRVHWDDIFMRYRVLEKLAKLVPALILNIILPLALTEHEVLASLADRLLDVTIVILFVRA
VYSALDAANEVADVNLVSRRLPIKSFVQLFKLFMFFVAIIISISVLADQSPVYFLSGLGV
ATGLVMLVFRDTILGFVAGIQLAANRMVSPTDWIQMDKYGADGAVEEVSLTTVKVRNWDQ
TITMIPAYALVSDAFKNWRGMSESGGRRIKRSVQIDISSIGFLTEQDRQRLSKINLLKSY
FAAKSQEISTFNAQVEDADMPVNSRHLTNVGTFRAYMLAYLKQHEKVHKDMTLLVRQLAP
TSSGVPIELYIFTNDIRWAAYEDIQADIFDHVFAILPEFGLRVYQGPTGADVRSLQNL
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
ttggatcaggaattacgcgcgtcaattactcaatggttggcgacagtcggtatcgatagt
caaccagcggacggtgtttcaactagtattcttgtcattgtctgtttcatagtggctttt
ataggctatatctttgtgaaacggggggttgtgagcacgatgaatatggtcatcactcgc
tcccgtgttcattgggacgatatcttcatgcgctatcgtgtattggagaagttggccaaa
ttggttcctgctcttattctcaacatcattctgccattggcactaaccgagcatgaagtc
ttggcgagtttggctgacaggctactcgatgtcaccattgtgattttatttgtgcgtgcg
gtttatagtgcattagatgccgccaacgaagttgctgatgttaatttagttagccgtcga
ctgccgattaagagctttgtacaactgtttaagctgtttatgtttttcgtcgctattatc
atctctatttcggttctggctgaccaatcgccggtttacttcttaagtggtttaggtgtt
gcgacaggtttggtgatgttggtcttcagggacactattttgggctttgtggctggtatt
caactagcagctaacagaatggtcagcccaacggattggatccaaatggataagtatggc
gcagatggggcagttgaagaggtatcgctaacaacggttaaggtgcgtaactgggatcaa
accattaccatgatccccgcttatgctttggtatcggatgcctttaaaaactggcgtggc
atgtctgaatctggtggccgtagaattaagcgctcggtgcagattgatataagttctatc
ggttttttaactgagcaagatagacaacgtttgtcgaagattaaccttcttaagtcctat
ttcgctgcaaagtcacaggagatcagtacatttaatgcacaggttgaagatgccgatatg
cctgtgaatagtcgtcacttgactaacgtgggtacctttagagcctacatgttggcttat
ttaaaacagcatgagaaggtgcataaagatatgaccttgttagtacgtcagcttgcgcca
acatcaagtggtgtaccgattgagctgtatatctttaccaatgatatcaggtgggcggct
tatgaagatatccaagcggatatctttgatcatgtttttgctatattgccagaatttggc
ttaagggtgtatcaagggccgactggtgcggatgttcgtagtttgcaaaacctctag
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