Shewanella piezotolerans: swp_0394
Help
Entry
swp_0394 CDS
T00791
Name
(GenBank) ABC transporter, transmembrane region:ABC transporter:Peptidase C39, bacteriocin processing
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
swp
Shewanella piezotolerans
Pathway
swp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
swp_0394
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swp02000
]
swp_0394
02044 Secretion system [BR:
swp02044
]
swp_0394
Transporters [BR:
swp02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
swp_0394
Secretion system [BR:
swp02044
]
Type I secretion system
Adhesin protein transporter
swp_0394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
Peptidase_C39
AAA_15
AAA_29
AAA_13
MMR_HSR1
AAA_23
DUF87
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ACJ27227
UniProt:
B8CHV1
LinkDB
All DBs
Position
complement(399488..401665)
Genome browser
AA seq
725 aa
AA seq
DB search
MPASASKKTDQWTISASQRVVVDPLLDSLVLLTEYFGSPCSSDSLAAGLPMQGHVLTPEL
LPQAAARAGLAAKLSRKGLNEITPILLPSILLLKDKKACLLRELDIEQDKAIIQLPETGG
EETLSIEELEAIYVGYLFLVKQEYRGDMGFDVHLHENKSHWLLQTLKDSAPIYRDALIAS
VLVNLFALVSPLFIMNVYDKVVPNLAFDSLWVLAIGAGIAYIFDLIMRQLRSYLIDVAGK
KVDIIVSSKLFAKAVGIPLEKRSPSVGGMAKQLGEFDSIRDILTSATITTLVDLPFALFF
LMIIYLVAGDLAFIPLFGSFIIIGYTLIMQPKLKAAIEETNKFSGLKHGHLIESLSSLES
IKSSGAEGLVQKSWQQMIGHTANWQLKAKKISTSVTNVATFVVQTSVIFVVILGVYRVAD
NEISMGGIIAAVILSSRAISPMAQLAGLMTRGNQTASALRQLNEIMTQEDEFENKGHLVS
RQRLRGQINAHTLGFSYPNSERPILHPMSLNIEPGERIAIIGRNGSGKSTLAKILVGLFQ
PSKGSITYDGLDSAQIHPSDLRRNFGYLPQDITLFHGSIRDNILFGTRQVTEHQLIRAVQ
LSGVNLFTNLESEGLDQQVGEGGRELSRGQRQTIALARATLNDPPVLLMDEPTASLDARA
EKQFIQAMHNVSRDRTLLLITHKMHLLNLVDRIIVLDRGHIVADGPKADVLKKLNEGLLA
GVVKK
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
gtgccagcttcagcttctaagaaaactgatcagtggacgatatcggcttctcaacgagtt
gtagtcgatccactgttagacagtttagttttgcttactgaatatttcggtagcccctgc
tctagcgattctttagccgcaggccttcctatgcaaggtcatgttttaacgcctgagtta
ttgccacaagcagcagctcgagcaggactcgccgctaagctttctcgtaaagggttaaat
gagatcaccccaattctgctacccagcatattgttacttaaggataaaaaggcttgcctg
cttagagagctcgatattgagcaagataaagcgattattcagctaccagagaccggtggt
gaagagacattatcgattgaagagctagaagccatttatgtcggatacctgtttcttgtt
aagcaagagtatcgtggcgatatgggctttgatgtccacctgcacgagaataaatctcac
tggttactgcaaacacttaaagattctgcaccaatctaccgagatgctttaattgcttcg
gttttagttaatctatttgcactggtatcaccgctattcatcatgaatgtatacgacaaa
gtcgtgcccaatcttgcattcgactcattatgggtgttagcaattggcgcaggtatagcc
tatattttcgatctgataatgcgccaattacgcagttacttaattgatgttgcaggcaaa
aaggtcgatattattgtctcatcaaaactgttcgccaaagccgttggtattccattagag
aaacgttcaccaagtgtcggtggtatggcaaaacaactaggtgaatttgacagtattaga
gatattctcacctcagcgaccatcaccactttagtggatctgccttttgcactatttttc
ttgatgatcatctatttagtcgcaggtgatctggcatttattccattgttcggtagcttc
atcattattggttataccctgattatgcagccaaaactcaaagctgctattgaagaaacc
aataagttctcaggcctcaaacatggccacctaatcgagtctttatcatcactggagtcg
ataaaatcgagcggtgctgaagggcttgtgcagaaaagttggcagcagatgattggccat
actgctaactggcagttgaaagcgaaaaaaatctccacctcagtcacaaacgttgccact
ttcgtggtgcaaacatctgtaatttttgtagttattctaggtgtttatcgcgttgctgat
aatgaaatatccatgggtggaattatcgctgcagtgatcttatccagccgcgccatatca
ccaatggcgcaattggcaggcctgatgacccgcggcaatcaaactgccagtgcactgcgt
cagctaaacgaaattatgacccaagaagatgagtttgaaaacaaggggcaccttgttagt
cgtcagcgcctgcgcggacagataaacgctcatactttaggctttagctatccaaactct
gaacgcccaatactgcacccaatgtcattaaacattgagcctggtgagcgaatcgccatc
attggtcgtaatggatcaggaaaaagtaccttagctaaaattttagtcggtctttttcag
ccgagtaagggcagcataacctacgatggtctcgactctgctcaaatacaccctagtgac
ttaaggcgtaactttggctatttaccacaagatatcaccctgtttcatggcagcattcgc
gacaacatcctttttggaacccgccaagtgactgagcatcaattgatcagagcggtacag
ctatccggcgttaacttatttaccaacctagaatctgaaggcctcgaccaacaagtggga
gaaggtggacgagaactgtctcgcggccaacgtcagacaatcgctctagcacgagcgacc
ttaaacgatcctcctgttttactgatggatgaacctactgcaagcttagatgctagagca
gagaaacagtttatccaagcgatgcacaatgtcagccgagaccgcacactgctactaatt
actcacaaaatgcacttattgaacttagttgaccgcattattgtgttagaccgtggccac
attgttgccgatgggccaaaagcggacgtgcttaagaagctgaatgaagggctacttgca
ggagtagttaagaaatga
DBGET
integrated database retrieval system
