Shewanella piezotolerans: swp_0535
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Entry
swp_0535 CDS
T00791
Name
(GenBank) Histone-like bacterial DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
swp
Shewanella piezotolerans
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
swp03032
]
swp_0535
03036 Chromosome and associated proteins [BR:
swp03036
]
swp_0535
03400 DNA repair and recombination proteins [BR:
swp03400
]
swp_0535
DNA replication proteins [BR:
swp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
swp_0535
Chromosome and associated proteins [BR:
swp03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
swp_0535
DNA repair and recombination proteins [BR:
swp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
swp_0535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
HU-CCDC81_euk_1
HU-CCDC81_bac_2
Peptidase_C80
Motif
Other DBs
NCBI-ProteinID:
ACJ27361
UniProt:
B8CI85
LinkDB
All DBs
Position
complement(555396..555668)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELVAKMAESAELTKAEAARALKSFEETVAEAMKNGEKISIVGFGSFETSERAARTG
RNPQTGKEIQIPAATVPKFKAGKTLKDSVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataagactgaacttgttgcaaaaatggctgaatctgcggaattaacgaaagctgaa
gccgcacgtgcattaaaatcttttgaagaaactgttgcagaagcgatgaaaaatggagag
aaaatctctattgttggttttggctcttttgaaacttcagagcgtgcagctcgcacaggt
cgtaacccacagactggtaaagagatccagatcccagcggctacagtacctaagtttaaa
gcgggtaaaacgcttaaagatagcgttaactaa
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