Shewanella piezotolerans: swp_0566
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Entry
swp_0566 CDS
T00791
Name
(GenBank) SNF2-like:Helicase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
swp
Shewanella piezotolerans
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
swp03021
]
swp_0566
Transcription machinery [BR:
swp03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
swp_0566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ACJ27390
UniProt:
B8CIB4
LinkDB
All DBs
Position
complement(579201..582107)
Genome browser
AA seq
968 aa
AA seq
DB search
MPFSLGQRWISDTESELGLGTVVGMEGRMVTVLFSATGENRLFSRSEAPLTRVIFNPGDK
VESHDEWSLTVTEVEEKDNLIIYHGIHSETGEQASLRETLLNHNIRFNKPQDRLFAGQID
RMDRFGVRYQCQLLRNKLATSDLLGLQGPRVGLIPHQQWIAHEVGQRFAPRVLLADEVGL
GKTIEAGLIIHQQLLTGRAERILVIVPDTLRHQWLVEMLRRFNLRFSVFDEDRCVEAYAD
NDNPFYTEQLVICSLELLRKKKRLEQALDADWDLMVVDEAHHLEWSEDAPSRAYKVVEAL
SEVVPGVLLLTATPDQLGHQSHFARLRLLDPDRFYDYPSFLKEEESYKDVATAADALACG
ESLSSEAIASLTQLLSEKDISDSINLIQDASANADKRNQAREELLQELLDRHGTGRVLYR
NSRASVKGFPTRNLHIHPQPMPEQYVTASRVSAMMNKHLDTNAKVRQVLSPEKIYQDFDS
GSASWWKFDPRVDWLIDFLKTNRSKKVLIIASQAETALSLEEALRTREGIQATVFHEGMS
IIERDKAGAYFAQETGGAQALICSEIGSEGRNFQFASHLVLFDLPLNPDLLEQRIGRLDR
IGQKNDVEIHLPYLAGTAQERLMQWYHQGLNAFECTCPSGHILFGEFSGELLETLTTDDE
SSLETLLDNTKSRYQELKVAMEQGRDKLLEINSHGGERANKLVESLAARDEDTQLIGSVI
RLWDIIGVEQEDSGENAIVLHPSEHMMFPTYPGLPEDGITVTFDRDMALSRDDIALITQE
HPIVQTGLDLITSSETGTTSVAVLKNKALPAGTVFLELIYMADASAPKSSQLYRYLPPTP
IRILLDKSGNNLSDNVTYESFDRQLSAVNRHIASKLVTASQAILHPLFAKGETFAANELK
LLTETAREKMTQQLTGELERLKALKAVNPNIRDEELTHLSEQMSELNRYLDSSQLQLDAI
RLVLVSHA
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccgttttcccttggtcaacgttggatcagcgataccgaatcagaactaggtttgggt
acagtcgtcggtatggaaggccgtatggtcactgtacttttttctgcgactggcgagaat
agactgttttctcgttcagaagccccgctaacacgcgttatcttcaatccaggcgataaa
gttgaaagccacgatgaatggtcattaaccgttaccgaagttgaagaaaaagataacctt
attatctaccacggcattcatagtgaaacaggtgagcaagccagcttgcgtgagacactg
ttgaatcacaatattcgctttaataagccacaagatcgcctgtttgccggtcaaattgat
cgcatggatcggtttggtgtgcgctaccaatgtcaattactgagaaataaactggcgacc
tccgacttacttggactacaagggccaagagttgggttgatcccacatcagcagtggatt
gctcatgaagtcggtcaacgttttgcgccgcgagtattactcgccgatgaagtaggcctt
ggtaaaaccattgaagccggtttaatcattcaccaacagcttttgactggccgcgccgaa
cgtattttagttattgtgccggacactttgcgtcaccaatggttagttgaaatgctgcgc
cgctttaacttgcgtttctcggtattcgatgaagatcgctgtgttgaagcttatgctgat
aacgataatcctttctacaccgaacaactggttatctgctcgcttgaactactgcgtaag
aaaaagcgtttagagcaagcattggatgccgattgggatctgatggttgtcgatgaagcg
catcatttagaatggtctgaagatgcgccaagccgcgcttataaagtggttgaagcatta
agtgaagtggttccaggcgtactactacttaccgcaacacctgatcaactcggccaccag
agtcactttgcccgcctacgcttgcttgatcctgaccgcttttatgactacccctctttc
ttgaaagaggaagagagctataaagatgtcgctaccgcagcggatgctttagcttgtggc
gaaagcctctcaagtgaggctatcgctagcctaacgcagttactatcagagaaagatatt
agcgacagtataaacctcatccaagacgcaagcgccaatgcagacaagcgcaatcaggct
cgtgaagagcttctacaagaactactcgaccgccacggtacaggtcgtgtgctgtatcgt
aacagccgcgcctcggtaaaaggtttccctactcgtaacctgcatattcatccgcagcct
atgccagagcaatatgttactgcttcacgtgttagtgccatgatgaacaagcatttagac
accaatgcaaaagtacgacaagtgctgagtcctgagaaaatctatcaagactttgatagc
ggtagtgccagttggtggaagtttgatcctcgcgttgattggttgattgatttccttaaa
accaaccgcagcaagaaagtccttattattgccagccaagctgaaacggcattgagccta
gaagaagcactgcgcacacgtgaagggatccaagccacggtgttccacgaaggcatgtcg
attattgaacgcgataaagctggtgcctactttgcccaagaaaccggcggcgcacaggca
cttatctgtagtgaaattggttcagaaggccgtaacttccagttcgcaagtcatttagtc
ttgttcgatctaccgcttaaccctgatctacttgagcaacgcattggtcgtctcgaccgt
attggtcagaaaaatgatgttgagatccacctgccttatttagcaggtactgcgcaagaa
cgattaatgcagtggtatcatcaagggttgaatgccttcgaatgcacttgtccaagtggt
catattctatttggtgagttctcaggcgagctgcttgaaaccttaaccaccgacgatgag
tcaagccttgagaccttgcttgataacactaagtcacgttatcaagaactgaaagtggcg
atggagcaagggcgcgataaactgctagagatcaactctcatggcggcgagcgtgctaac
aagttggttgaaagcttggcagccagagatgaagatactcagctcattggttcggtgatc
cgcctgtgggatatcatcggtgttgagcaggaagatagtggtgaaaatgcgatagtgctg
cacccaagtgagcatatgatgttcccaacctatccaggtctgccggaagatggcattact
gtcactttcgaccgagatatggcgctttcacgtgatgacatcgcgcttattactcaagag
caccctattgtacagactggtttggacttaatcacctcttcagaaacgggcaccactagt
gttgcagtgttgaaaaacaaagcattacccgctggcactgtgttcttagagctaatctat
atggctgatgcatcggcgccaaagtctagccagctatatcgttacctgccgccaacacct
attcgtatcttactggataagagtggtaacaacctatctgataatgtgacttacgaaagt
ttcgacagacagctaagtgctgttaaccgtcatattgcgagtaagctagtgaccgcctca
caagcaattttgcatccgctatttgctaaaggggaaacctttgcagcgaatgaactcaaa
ttattgactgaaacagctcgtgagaaaatgactcagcaattgactggtgagcttgagcga
ctaaaagcacttaaagctgttaacccaaatattcgtgatgaagaattaacgcatttaagc
gaacagatgagcgagctaaaccgctaccttgatagtagccaactgcaacttgatgctatt
cgtttggtgttagtcagccacgcttaa
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