Shewanella piezotolerans: swp_0674
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Entry
swp_0674 CDS
T00791
Name
(GenBank) Conserved hypothetical protein
KO
K06958
RNase adapter protein RapZ
Organism
swp
Shewanella piezotolerans
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
swp03019
]
swp_0674
Messenger RNA biogenesis [BR:
swp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
swp_0674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_16
Integrase_1
AAA_22
AAA_18
ABC_tran
AAA_29
nSTAND_NTPase5
nSTAND3
NACHT
Zeta_toxin
DUF7033
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ACJ27492
UniProt:
B8CIL6
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All DBs
Position
complement(679489..680343)
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AA seq
284 aa
AA seq
DB search
MKLVLVSGRSGSGKSVLLRMLEDLGYYCVDNLPLPMMGTLLEQLTGNSELVAISVDIRNM
PEKDTELEKHLTNLPKGVELLSFFLNSSDEVLLKRYNETRRLHPLSHSNISLKEAIQLEG
RQLEPLAKIVDHYIDTSNLNIYDLNDQVREILLGNIDKELMIKFESFGFKHGMPTEADFM
FDVRFLPNPHWEPELRPMTGLDKPVQDFLNQRPLVNKFIWQIENLLRTWLPDLERNNRSY
LTIAIGCTGGQHRSVYVTERLAEHFKDGRHKVTTSHRELKNAKD
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgttcttgtctctggtcgttcaggctctggtaaatccgttcttctaaggatg
ttagaagatctcggctattattgtgtcgataatcttccgttacctatgatgggaacgctg
ttagagcagctaacgggtaattcagagctcgtagcaattagtgtcgatattcgcaatatg
ccagaaaaagacacagagctggaaaagcacctaacgaatttgcccaaaggtgtcgagcta
ctcagtttcttcctaaactcaagcgatgaagtattgcttaaacgctataacgaaacccga
cgacttcatccactgtctcattcgaatatttcgttaaaagaagccattcagcttgaaggc
cgtcagctagagccattagcaaaaatagtcgaccactatatcgatacttcaaacctcaac
atttacgatcttaacgatcaagttcgtgaaattttgttgggtaatattgataaagagcta
atgatcaagtttgagtcttttggatttaaacatggtatgcctaccgaagccgactttatg
ttcgatgttagatttctacctaaccctcactgggagccagaactaaggccaatgacaggg
cttgataagccggtgcaggactttctcaatcaacgcccattggtgaataaatttatctgg
cagatagaaaatttactgcgtacatggctgccagacttagagcgtaataatcgcagttat
ttgaccattgctattggttgtaccggaggccaacatcgctctgtgtatgtaaccgaaagg
cttgctgaacactttaaagatggacggcataaagtgacgactagtcaccgcgagttaaaa
aatgccaaagattga
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