Shewanella piezotolerans: swp_0865
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Entry
swp_0865 CDS
T00791
Name
(GenBank) Collagenase
KO
K01387
microbial collagenase [EC:
3.4.24.3
]
Organism
swp
Shewanella piezotolerans
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
swp01002
]
swp_0865
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
swp02042
]
swp_0865
Enzymes [BR:
swp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.3 microbial collagenase
swp_0865
Peptidases and inhibitors [BR:
swp01002
]
Metallo peptidases
Family M9
swp_0865
Bacterial toxins [BR:
swp02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
swp_0865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M9
PPC
Motif
Other DBs
NCBI-ProteinID:
ACJ27674
UniProt:
B8CJX1
LinkDB
All DBs
Position
871314..873155
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AA seq
613 aa
AA seq
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MPDPVVPDPVIPETPAAGLISLNSAIKHITLTEPRAYFVDVTEAAPTLIVGLMAGEAGKN
IGNPALYVRATNEASSGESGEFDCVSNYTSGEYEYCVIDNVEPGRYHILVDASASDAAVD
ATLYTSTTLFNSSKRCDEVDVQVRAQDLTAAQTDEVCRSLRDTKARFDTTLSAAISPAFG
DIVEGDKNDITNVNIFSSRRNHKLWVEHLFNNDNGSGIYFESEATDWLHRSDVFTFNALE
WNGGRYKIRSLDHEYTHALDARYNKEGEYDESKGFSWWSEGLAEYIGIHYNNPYQNMTTA
SETTKYSLQQVFNGAANAYSWGQLVVTFLLEQKPAIVTQILTQMRAGEWNELKSLLAQVA
TDSQADFEAWYQGQLRSDYVASVTSITVGEFTELTGRSGRLYVVDVAAGTDSITFSTSSG
SADIDLYVNQGAAFHPSDANAATAQSVTKDSNEESVTITNPVVGKYYIAAGDSFAGSDII
DAYLSVCVGSNCSVALPDPMAVTYEIEPYMPYWPAKGTIGSCNLAQSYSSGAGNATGLTI
TNTTDNNVDVYWVSRDSGKKSGSAYASLAKDAVYTETFWKLGDRIMLTDPAGECLGVAIL
NDTNNEFSLVVEN
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
gtgccagatcctgtcgtgccggatcctgttattcctgaaactccagctgcaggtttaatc
tctcttaactctgcaatcaagcatattacactgactgagccacgcgcatattttgttgat
gttaccgaggctgctcccactttgatcgttgggctaatggccggtgaagcggggaaaaat
attggtaatccagcgctttatgttagagcaaccaatgaagcgtccagcggtgagagtggt
gagtttgactgcgtatcaaattacactagcggtgagtatgaatattgcgtcatcgataat
gtagagcctggtcgttaccatattctagtcgacgcaagcgccagtgatgccgctgtcgat
gccacgctttataccagtaccactttatttaacagtagcaagcgctgcgatgaagtggat
gttcaggtacgtgcccaggatttaactgcagcacaaactgatgaggtgtgtcgttcatta
agggacactaaagcacgttttgataccaccttgagcgctgcaatctcgcctgcattcggt
gatattgtcgaaggtgataaaaatgacatcactaacgttaatattttctcaagtcggcgc
aatcataaattatgggttgagcatctttttaataatgacaatggcagtggtatttacttt
gaatcggaagccactgattggttacatcgctcggatgtgtttacctttaatgcacttgag
tggaatggtggtaggtacaaaattcgctctctggatcatgagtatacccatgcgttagat
gcccgttataacaaagagggtgaatatgacgaatctaaaggttttagttggtggagcgaa
ggtttagctgagtacattggtattcattacaataacccttaccaaaacatgaccaccgca
agcgagacgactaaatacagcttacaacaagtctttaacggtgctgctaatgcctactcc
tgggggcaattggtggtaacgttcttacttgaacaaaaaccagccattgtcacccagata
ctaacccagatgcgtgcgggtgaatggaatgagttaaagtcattattggcgcaggtggcg
acagacagtcaggctgattttgaagcttggtatcaaggtcaactacgctctgattatgtg
gcaagtgtaacttctattacagttggtgaatttacagagctaactggtcgtagtggccgc
ttgtatgttgttgatgttgctgctggtacagattcaataacctttagcacctctagtggt
tctgctgacattgatttatatgtgaatcaaggcgcagcttttcaccctagtgacgctaat
gctgcaacggctcaatcggtcactaaagatagtaacgaggagagcgtaaccattactaac
ccagtagtgggcaaatactacattgccgctggcgacagtttcgcaggctcagacattatc
gatgcctatttgtcagtgtgtgtgggtagtaattgcagtgtcgctttaccagatccaatg
gcagtgacttatgaaattgaaccatacatgccatattggccagcaaaaggcactattggt
agctgtaatttagcacaaagctacagcagtggcgctggtaacgcgacaggactgacaatt
actaatacaacagacaataacgtggatgtttactgggtaagtcgagactctggtaaaaaa
agcggcagtgcgtatgcttcgcttgccaaagatgcggtttacactgaaacattttggaag
ctcggtgatcgtatcatgctaacggatcctgctggagaatgtttaggcgttgcgattcta
aacgatacaaataatgaattttcgctagtagtagaaaactaa
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