Shewanella piezotolerans: swp_1217
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Entry
swp_1217 CDS
T00791
Name
(GenBank) Transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
swp
Shewanella piezotolerans
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
swp03021
]
swp_1217
03009 Ribosome biogenesis [BR:
swp03009
]
swp_1217
Transcription machinery [BR:
swp03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
swp_1217
Ribosome biogenesis [BR:
swp03009
]
Prokaryotic type
rRNA transcription factors
swp_1217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_NusA_C
S1
DUF2187
KH_KhpA-B
KH_2
Glyoxalase_4
Motif
Other DBs
NCBI-ProteinID:
ACJ28011
UniProt:
B8CKH2
LinkDB
All DBs
Position
1222524..1224023
Genome browser
AA seq
499 aa
AA seq
DB search
MNKEILLVAEAVSNEKGVPREKIFEALEIALATATKKKYEGDIEVRVAIDRKTGGYETFR
RWMVVEDTGEPLENPFREITLEAAVYDDPEIELGGFIEDEIDSVAFDRITTQTAKQVIVQ
KVREAERAQIVDQFRDREGELIVGVVKKSNRESVVVDLGSNADGVLFKEDLISRESFRPG
DRVRALLYSVRPEARGAQLFLTRTKSEMLIELFRVEVPEIQDEMIEIMGAARDPGSRAKI
AVKSNDRRIDPIGACVGMRGARVQAVSNELGGERVDIVLWDDNPAQYVINCMAPADVASI
IVDEDNHSMDIAVEADSLAQAIGRNGQNIRLATQLSGWELNVMTVDDMKAKHQAESAKVV
NLFIESLDVDSEFAQVLADEGFTSLEEIAYVPSSELLEIEGFDEDIVESLRERAKAAIST
RALATEEALDGAEPSEDLLALEGLDRHLAFVMASKGVITLEDLAEQGIDDLIEIEELTEE
KAGELIMAARNICWFGEEA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagagatcctgctagtcgctgaggcggtttcaaatgaaaaaggtgtacctcgc
gaaaagatttttgaagcgttggaaattgcactagccacagcaaccaagaaaaaatatgaa
ggtgacattgaagtacgtgttgccattgatcgcaaaactggtggttacgaaacattccgt
cgttggatggttgttgaggacactggcgagccgttagagaaccctttccgcgaaattacg
ctcgaagcagctgtatacgacgatcctgagattgagcttggtggctttatcgaagatgaa
atcgattcagtggcatttgaccgtattacgacgcaaactgcgaaacaagtcatcgttcag
aaagtacgtgaagctgaacgcgcacagattgttgaccaatttcgtgatcgcgaaggtgag
ctaatcgttggtgtcgttaagaaaagtaaccgtgaaagcgtggttgttgatttgggtagt
aatgctgatggcgtactgttcaaagaagaccttatctcacgtgagtctttccgccctggt
gaccgtgttagagcattgctttactcggtacgcccagaagcgcgcggtgcacagctattc
ttgactcgcactaaatcagagatgctcattgagcttttccgtgttgaagtgccagaaatt
caagacgaaatgatcgaaatcatgggcgctgctcgtgatcctggttctcgcgcaaagatt
gctgttaagtctaacgaccgtcgtatcgatcctatcggtgcgtgcgttggtatgcgtggt
gcacgtgttcaagccgtttcaaacgagcttggcggtgagcgtgttgatatcgtgctttgg
gacgataacccagcgcaatacgttatcaactgtatggcgccagctgatgttgcttcaatc
attgtagatgaagacaaccactctatggatatcgctgttgaagctgatagcttagcgcaa
gcaattggtcgtaatggtcaaaacattcgtttagcaactcaactatctggttgggaactt
aacgtaatgactgttgatgatatgaaagctaagcatcaagcagagagcgctaaagtagtt
aacttgttcatcgagtcattagacgtagatagcgagtttgctcaagttttggctgacgaa
ggctttacctctttagaagagattgcttacgtaccaagctcagaactactagaaattgaa
gggtttgacgaagatatcgttgagtctttaagagaacgtgcaaaagctgcgatctcgact
cgcgcacttgcgactgaagaggcacttgatggtgctgaaccaagtgaagacctactagcg
ttagaaggtttggatagacatttggcattcgtaatggcaagcaaaggcgtaatcacgcta
gaagatttagccgaacaaggcattgatgatttgatcgaaattgaagaattaacagaagaa
aaagcaggtgagctcattatggctgcccgtaatatctgttggtttggcgaagaagcataa
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