Shewanella piezotolerans: swp_1220
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Entry
swp_1220 CDS
T00791
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
swp
Shewanella piezotolerans
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
swp03016
]
swp_1220
Enzymes [BR:
swp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
swp_1220
Transfer RNA biogenesis [BR:
swp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
swp_1220
Prokaryotic type
swp_1220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ACJ28014
UniProt:
B8CKH5
LinkDB
All DBs
Position
1227248..1228198
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AA seq
316 aa
AA seq
DB search
MARRSRGRHIDGVLLLDKDTGMSSNFALQRVKRFFNANKAGHTGALDPLATGMLPICLGE
ATKFSQHLLDADKRYLVTAKLGQRTDTSDSDGEVVQTREIDFTQEQLDTALEYFRGKTMQ
VPSMYSALKYQGQPLYKYAREGIEVPREARPINVFELNFISLEGDELTLDIHCSKGTYIR
TITDDLGEMLGCGAHVIMLRRTQVAGYPYDNMVSLAELEALVTKVEAESLTLAEVLDPLL
LPMDTAVSDFKEINVSDDIAPFLMNGNPVQVANLPVDELVRITLGVERRFVGIGQMNDDG
LLAPKRLIVLRDEAAQ
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgttctcgtggtcgtcatatagatggtgtgttgttgcttgataaagacact
ggcatgagctcgaactttgcattgcaaagagtgaaacgcttttttaatgcaaacaaagcg
ggtcatactggtgcgcttgatcccttagccacaggcatgttgcctatatgcttaggtgaa
gcgaccaagttttcgcagcaccttctcgatgctgataaacgttacctcgtcaccgccaag
cttggtcagcgcactgacactagcgattccgacggtgaagttgttcagactcgtgaaatt
gactttactcaagagcagcttgatacagcacttgagtattttcgcggtaaaacgatgcaa
gtgccgtcaatgtattcagcgcttaaatatcaaggtcagcccttgtataaatatgcccgt
gaaggcattgaagtaccgcgtgaagcacgtcctatcaatgtatttgagcttaactttatt
agcctagaaggcgacgagttaaccttagatattcattgctctaaagggacctatatccga
accattactgatgacttgggtgagatgctcggctgtggcgctcatgtgataatgctgcga
cgtactcaagtcgcgggttatccatacgacaatatggtctctctagcagagcttgaagcg
cttgttactaaggttgaagctgagtcattgactttagctgaggtattagatccgcttctt
ctaccgatggatactgcggtgagtgatttcaaagagattaacgtctccgatgatatagcg
ccgttcttaatgaatggtaaccctgtccaggttgcaaatttgcccgttgatgagcttgtg
cgtatcactttaggtgttgagcgtaggtttgttggcattggtcagatgaatgatgatgga
ctgcttgcgccgaagcgacttattgttttaagagatgaggcagctcaatag
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