Shewanella piezotolerans: swp_1242
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Entry
swp_1242 CDS
T00791
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
swp
Shewanella piezotolerans
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
swp03400
]
swp_1242
DNA repair and recombination proteins [BR:
swp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
swp_1242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
AAA_22
Lon_C
SLFN-g3_helicase
nSTAND3
AAA_18
AAA_14
Rad51
cobW
NPHP3_N
AAA_19
CobU
AAA
AAA_30
DUF7125
ABC_tran
AAA_16
AAA_11
Zeta_toxin
NACHT
AAA_28
DZR
AAA_24
TsaE
Motif
Other DBs
NCBI-ProteinID:
ACJ28036
UniProt:
B8CKJ7
LinkDB
All DBs
Position
1257386..1258759
Genome browser
AA seq
457 aa
AA seq
DB search
MAKNKTAYVCNECGQDFPRWQGQCSACQEWNTISELKISTIKPTTATSAGYAGAVGGGSK
KLTEIEEVEAQKRLTGIGELDRVLCGGLTTGSVNIISGDPGAGKTTLLSDLVARMSQLMP
SLYCTAEESLSQFKNRVNRLKLNCNEDNLYLMAETSVEAIIAELEAKQVKFAVIDSIQAV
VTEMANGSPGSPSQVKGSAQALTQYCKQNNVTMFLVAHVNKNNETAGPQTLIHIVDCLTH
IECNDGQVRTLRANKNRFGDVDTVGIFRMTERGMLSVDNPSEIFLSGSSTESPGAAITCI
RKGNRNLLLEIQCLTTETEGEFPQRVCVGLNMNRIKMLTGILRKHTKTKIFHDTYFNLVG
GLKIDESETCIDLALVTALLSSLNDFVVPRTTCIMGELSLNGDVRPIDSGVPRVKEAVQH
GFTEIYIPFRNYHKSMEGLGAKVHAIKTIHELIELIN
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaataaaacagcttacgtatgtaatgaatgtggtcaagactttcctcgctgg
cagggccagtgtagcgcttgccaagagtggaacaccattagtgaacttaaaatctctacc
attaaaccgacaacagcaaccagtgccggttacgctggcgctgttggtggtggttcaaaa
aagctcactgagattgaagaggtcgaggcacaaaaaaggctgactggcattggtgagtta
gatagagtcttgtgcggcgggttaacgaccggttctgtcaatattatctctggcgaccct
ggcgcaggtaaaacgactttattgtctgatcttgttgcgcgtatgtcgcagttaatgcca
tccctttattgtactgcagaggaatctctatcgcagtttaaaaaccgcgtaaatcgatta
aagctcaattgtaacgaagataacctttatcttatggctgagaccagcgtagaggcgatt
attgcagagcttgaagctaagcaggtgaagttcgcagtgatagattctattcaagcggtt
gtcacagagatggcgaatggcagtcctggttcgccttcacaagtaaaaggcagtgcccaa
gcgctgacgcaatactgtaagcaaaacaatgtcaccatgtttttggtggcgcatgtgaat
aaaaacaatgaaacagcaggcccacagacccttattcatatcgttgactgtttaacccat
atcgagtgcaatgacggccaagtacgcacgcttagggccaacaaaaaccgttttggtgat
gttgatactgtcggcatatttcgcatgactgagcgcggcatgttgagcgttgataacccc
agtgaaatatttctttctggttcgagcactgaatctccaggagccgcgatcacctgtatt
cgtaaaggtaatcgcaatctgctacttgagatccaatgtttgaccactgaaaccgagggc
gaatttccacagcgggtatgtgttggccttaatatgaatcgtattaagatgttaacgggt
attttacgcaaacacactaagacgaaaatcttccacgatacctactttaatttggtggga
ggcttaaagattgatgagtctgaaacctgtatcgatttagctttggttacagccctgctg
agtagccttaatgattttgtggtaccaaggacaacctgcatcatgggcgagttaagtctt
aatggcgatgttaggccaatcgatagcggtgtgccgagagtaaaagaagcggtgcagcac
ggttttactgagatctatattccttttaggaattatcataaatcgatggaagggttaggg
gcgaaagtccatgcgattaaaacgatccatgaacttattgagttgattaactag
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