Shewanella piezotolerans: swp_1360
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Entry
swp_1360 CDS
T00791
Name
(GenBank) tRNA pseudouridine synthase D, TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
swp
Shewanella piezotolerans
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
swp03016
]
swp_1360
Enzymes [BR:
swp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
swp_1360
Transfer RNA biogenesis [BR:
swp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
swp_1360
Prokaryotic type
swp_1360
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ACJ28147
UniProt:
B8CJQ0
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All DBs
Position
1380158..1381222
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AA seq
354 aa
AA seq
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MSELHYLYGKPNAKADLRTQNSDFLVQEILPFAPTGEGEHHLLHIRKDGLNTVEVAKMLS
SFAHVHPKEVTYAGQKDKNAVTEQWFGVRIPGKETPDWQKMNSEQLTLLSASRHGKKLRI
GALAGNRFTLVLRNVSKVEDVVARLEKIAQAGVPNYFGEQRFGHDGKNIIFGRQMFTGRK
VKDRKKRSMYLSAVRSNLFNLASSARLAAHGTATLAGDCVMLAGSKSYFTAEHWDETLVE
RLNNKDIQLSAPLWGRGEPLAQSDAAELESTALAEYSVDRDGLEQAGLNQERRTLLLEPQ
HLQYQVEDNTITLKFALPSGSYATSVLRELVDYQDVQEAARKAMLAAQQDNVSI
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacttcactacttatacggcaagcccaacgctaaagcggatttacgtacccag
aacagcgattttttggtgcaggagatcttgccgtttgcgccaacaggcgaaggtgagcac
catctgctacatattcgaaaagatggtttaaacaccgttgaagtcgctaaaatgctttca
agttttgcccatgtgcaccccaaagaagtgacttatgccggtcaaaaagacaagaatgcg
gtaacagaacagtggtttggcgtgcggatccctggcaaagaaacaccggattggcagaaa
atgaatagtgaacaactcactttgttgtcagcatctcgtcatggaaagaagttgcggatc
ggtgcgctagcgggaaaccgtttcaccttagtgcttaggaatgtatcaaaggttgaagat
gtagtcgctcgtctagagaaaattgcgcaagctggtgtgccgaattattttggcgaacag
cgcttcggccatgatggaaaaaatattattttcggtcgacagatgtttactggccgcaaa
gtaaaggatagaaaaaagcgcagtatgtatttatctgcagtgcgctctaacttgtttaac
ttagctagctcagcaagattagcggctcacggcacagcaacactagcgggtgattgtgtg
atgcttgctggtagtaagagttattttactgctgagcattgggatgaaacgttagtagag
cgtttaaacaacaaggacattcagctatcggcacctttatgggggcgaggggagcctctg
gcgcaatcagatgcggcagaacttgaatccacagcgttagcagaatattcagttgataga
gatggattagagcaagcgggtcttaatcaagagcgcaggactttgctacttgagcctcaa
catttgcagtatcaagttgaagataatactattactcttaaatttgctttaccatcaggc
tcttatgcaacatcggtattacgcgaactggttgactaccaagatgtgcaggaagccgca
cgaaaagcgatgctagcagcacaacaggataacgtttcaatctaa
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