Shewanella piezotolerans: swp_1375
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Entry
swp_1375 CDS
T00791
Name
(GenBank) TPR repeat protein
KO
K07114
Ca-activated chloride channel homolog
Organism
swp
Shewanella piezotolerans
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swp02000
]
swp_1375
Transporters [BR:
swp02000
]
Other transporters
Pores ion channels [TC:
1
]
swp_1375
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_7
VWA_2
Fis1_TPR_C
TPR_1
TPR_6
SRP_TPR_like
TPR_8
TPR_12
ANAPC3
TPR_19
DUF7638
TPR_17
Motif
Other DBs
NCBI-ProteinID:
ACJ28162
UniProt:
B8CJR5
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Position
1399221..1400786
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AA seq
521 aa
AA seq
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MLTSFQFSEPVWLLLFFPIALLMYGLWRNRVLAEEQAGDGIIAAHLAKTFSRQNSHKTAT
APITLTLLCGSLIAVALAGPSWLKPSGDNIKAPLVIALDLSPSMQERQHGIEHLTRAKLA
ITTLLQQGSARPISLVAFSGSSHQVLPASEQLALLTLYLGYLSPDIMPVEGDDIDSLVSV
ISAMPETEEFGVDLLIFSDGFTGGSELSSLVDRLKAQVVFAALTTEAEEVARKFGYAVIS
SGSLIETPDRLLAKVASLEKRALGESSQRVNFGYWLLYPAGLILLLFFRKGFSLYWASAI
VLCVSLLPAPAQASWLDWFFSDNQQAQYYYNQGDYQTAAILFTDPQWKALAYYQAKEYSK
AAKIYRQQNDLQSLFNLATTYTRARNYSKAQSLYQLLIEIDANFPGAETNLRIVTQLIRD
IKQLGESQQEEHPPESVDPDDMTDPELGADKPQMGKITVEIQQLSVEELLNSETKKQQWL
TDISKDPQQFLAAKFQAEYNHAQLQSPSSLEQRPEVTTNEE
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgctgactagctttcagttttcagagccagtctggctattactcttttttccgatagct
ttgttgatgtatgggctttggcgcaaccgagtgttggctgaagaacaagctggtgatggg
atcatcgccgctcatcttgcaaagaccttctctaggcaaaatagccacaaaacggcaaca
gcgccgattaccttaacactactttgcggcagtttgattgcggttgccttagcggggccc
agctggttaaagcccagtggtgataacattaaggcgccgctggtaatagccctagattta
tcaccttcgatgcaagagcggcaacacggtattgagcatttaactcgagcaaagttagcg
attaccaccttgttacaacaggggagtgcaagacctatctccttggtggcattttcaggt
agtagtcatcaagtattacccgcgtcagaacaattggcattactgactttatatctggga
tatttatcgccggatataatgcctgtagagggggatgatattgatagtttggtcagcgtt
atcagtgctatgccagagactgaagagtttggggtcgatctgttgatcttttctgatggt
tttactggtggtagcgaattatccagcttggttgatcgtctaaaagcacaggtagtattt
gcagcattgaccaccgaggctgaagaggttgcccgtaagtttggttatgctgttatcagt
agtggtagtttgattgaaacccctgataggttgcttgccaaagtcgctagtttagagaaa
cgtgcactaggggagtctagccaacgggtcaactttggctattggttgctctaccccgca
gggcttattttactgttgttttttcgtaaaggctttagtctttattgggcaagcgccatt
gtattatgcgtcagtttactgccggctcccgcacaagcgagttggctcgattggtttttc
agtgataatcaacaagcgcagtactattacaatcaaggtgattatcaaactgcggcaatc
ctctttactgacccacaatggaaagcactggcgtattaccaagccaaagagtacagcaaa
gcggcaaaaatatatcgccaacagaacgatttgcaaagtctatttaatctagcgacgaca
tacactcgtgccaggaattacagtaaagcacaatcactgtatcaattgttgattgaaatc
gatgcaaacttccctggtgccgaaactaatttacgcattgtcacccaactcattcgagat
attaaacagcttggcgaaagccagcaggaggaacatccacctgagtcggttgaccccgat
gacatgacggatcccgagcttggcgcagataaaccgcagatgggtaagattacggttgag
atccagcagttatcggttgaagaactattgaatagcgagactaaaaagcagcagtggttg
accgatatcagcaaagatccacagcagttcttagcggcaaaatttcaggctgaatacaac
cacgctcaactgcaaagtccttcttcgttagagcaaaggcctgaggtgacgactaatgag
gaatag
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