Shewanella piezotolerans: swp_1466
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Entry
swp_1466 CDS
T00791
Name
(GenBank) Extracellular solute-binding protein, family 3:SLT
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
swp
Shewanella piezotolerans
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
swp01011
]
swp_1466
Enzymes [BR:
swp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
swp_1466
Peptidoglycan biosynthesis and degradation proteins [BR:
swp01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
swp_1466
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
Lysozyme_like
Motif
Other DBs
NCBI-ProteinID:
ACJ28252
UniProt:
B8CKS6
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All DBs
Position
complement(1499603..1500961)
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AA seq
452 aa
AA seq
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MEQKQVAVIEPKTELVVGTLFGPQIYFSSGQGESGYDYEMAARFAKYLNLELKMMPFANI
SELYGALRAGKIDIIAAGLADTPSRREKYRVGPPLYRVNQVLVYRQGTRPPKDINDLEGD
ITVITDSSFVDTLSELQKSNPNLMWKQEKDKDSEELLAMIASGDLQYTIADSTSLDINRR
FMPELREGAVLKEKQPVVWLLPPNNSDRLMSKLLAFWHIEKRSGTLAHLNEKYFAHVRRF
DYVDTRAFIRAIDNKLPKYQETFEKYAGDIDWRKLAATAYQESHWNPNARSPTGVRGLMM
LTLPTAKQVGIENRLDPYQSIQGGAKYLNSMLERLPESIPESQRMWFALASYNIGFGHVE
DARKLAQSMGLNPSAWRDIKEVLPLLQKRKHYKKTRYGYARGNEAVHYVDSIRRYYDTLV
WIDNQNILLDLKSDVTQTADNSGQTMEGAQPQ
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtggaacaaaagcaagtggcagtcattgaaccaaaaacagagttagtcgtcggcacctta
tttggtcctcaaatctattttagctccggtcagggtgaatctggttacgattatgagatg
gcagcaagattcgctaagtatctcaaccttgagctgaagatgatgccatttgccaacatt
agtgagttatacggcgcactaagggctggaaaaatcgatattatcgctgcgggtctggct
gacacgccttcaagacgagaaaaatatagagtaggccctccgctctatcgtgtaaatcaa
gtattggtatataggcaaggcacacgaccaccaaaagatatcaacgatctcgagggcgat
ataaccgttatcaccgactcgtcgtttgtcgatactctaagcgaactgcaaaaatccaac
cctaatctaatgtggaaacaggaaaaggataaagactccgaagagttattggcgatgatc
gccagtggagacttacagtacaccatcgcagactcaaccagtttagatattaacagacgc
tttatgcctgaactacgtgaaggcgccgttcttaaagagaagcaaccggtcgtatggcta
ctgccacctaacaatagcgaccgcttaatgagtaagttgctggcattttggcacatagaa
aaacgcagcggcacccttgcccatttaaatgaaaagtactttgcccacgttagacgtttt
gactatgtcgatacccgtgcctttatccgtgctatcgataataagctacccaagtatcaa
gaaacctttgaaaagtatgctggcgatatcgactggcgtaaactcgccgcgaccgcatat
caagaatcgcactggaaccctaatgcccgctcacctactggtgtacgcggactgatgatg
ctcacccttccgaccgccaaacaagttggaattgagaataggcttgatccgtaccaaagt
attcaaggtggtgccaagtacctcaacagcatgctcgaacgcttgcctgagtcgatcccc
gagagtcagcgtatgtggtttgcccttgcctcttataatattggttttggtcacgttgaa
gatgcaaggaaactggcgcaatcgatgggacttaaccccagtgcttggcgtgacattaaa
gaagtattaccgctgttacaaaaaagaaaacactacaaaaagactcgatacggctacgcc
cgcggcaatgaagccgtacactatgtcgacagtattcgccgttactacgatacgctagtg
tggatcgataatcagaacatattgcttgatcttaaaagtgatgtgacccaaacagcagat
aacagtggccaaacaatggaaggtgcccagccacaataa
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