Shewanella piezotolerans: swp_1663
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Entry
swp_1663 CDS
T00791
Name
(GenBank) Ada regulatory protein, putative
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
swp
Shewanella piezotolerans
Pathway
swp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
swp_1663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
swp03000
]
swp_1663
03400 DNA repair and recombination proteins [BR:
swp03400
]
swp_1663
Enzymes [BR:
swp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
swp_1663
Transcription factors [BR:
swp03000
]
Prokaryotic type
Helix-turn-helix
AraC family
swp_1663
DNA repair and recombination proteins [BR:
swp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
swp_1663
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
ACJ28438
UniProt:
B8CLB2
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All DBs
Position
1723103..1724632
Genome browser
AA seq
509 aa
AA seq
DB search
MVNHDCIIDSNICRKARLARDARFDGQFFTGVLTTGIYCRSICPAVSPKEENVRYFDSPL
KAANAGLRPCLRCRPDSAPGSYAWKGTATTLERAIQLIDSGVLIGADAVSIERLSERLGV
SSRYLRKLFNEGVGTSIKQYALYRQLMFAKQLLHQTELTITQVGLAAGFNSIRRFNEAFK
QVLKLTPSTFRKQAISPETQSISSDKSVSDASELNFVASIKLSVELSYRPPLAWQAQHDF
YQDRAVSNMEWLQSESNYGRSFSLNGVSGYFDANHNQARNSFTVDIVLDNEQGLIELSAI
IGNIKRLLDLNANMQAIEQDLALLVPLKPLMISGLRLPGTWSTFEAGCRAVLGQQVSIIQ
ASKLLNQFVLAYGERRAIGDKEVVLFPTPEAVASASLDELKMPGARKLALNALGEFVKQH
PDKALDDWLSIKGIGPWTIAYAQMRGASHPDILLCGDLVVKKRVLSLYQQHQQDAGEIDA
IDYPALTKDITKTISPWGSYLTFQLWNLS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaccatgattgtataattgacagcaacatttgccgtaaagcgagactcgctcga
gatgctaggtttgacggccaattttttactggtgtgctaacgacaggtatttattgtcgt
agcatctgtccagcagtcagtccgaaggaggaaaatgtacgttattttgattcgccattg
aaagcagcaaatgcgggtttaagaccttgtttacgctgccgtccagacagtgcgccaggc
tcatatgcttggaaggggactgcaactacgctagaaagggcgatacaactcattgacagt
ggcgtactaataggagctgatgctgtcagtatcgagcggctgtctgaaaggcttggagta
agtagtcgctatcttcgaaagctatttaacgaaggcgttggaacttctattaaacaatat
gcactatatcgacagctaatgtttgccaaacaactattgcatcagacagaattaacgatt
acgcaagtcggattggccgctggctttaacagtattcgtcgtttcaatgaagcttttaaa
caggtattaaagctcacgccgtcgactttcagaaagcaggctatatctcctgaaactcag
tcaatatcctccgataagtcagtaagcgatgcatcagaactaaacttcgttgcatcgatt
aaattgtctgtggaactatcataccgtccaccgttagcatggcaggcgcaacatgacttt
tatcaggacagagcggtaagtaatatggaatggcttcagtctgaaagcaattatggacgc
agctttagcctcaatggtgtgagtggttacttcgatgccaatcacaatcaggcacgtaat
agtttcactgtagatattgttctggacaatgagcaagggctgatagagctcagtgctatt
attggaaatattaaaagactcctcgaccttaatgccaacatgcaagcaatagagcaagat
ttagcattattagtgccgctgaagccactgatgatctcaggtttacggctaccaggaact
tggtcaacctttgaagctggttgcagggctgtactggggcaacaagtgagtattatacaa
gcgtcgaaactactcaatcagtttgtacttgcttacggtgaacggcgcgctatcggtgat
aaagaggttgtgctatttccaacccctgaggccgtggctagtgctagtctagatgaatta
aaaatgcctggtgcaagaaaactcgcacttaacgctttaggtgagtttgtaaagcaacat
ccagataaagcgcttgatgattggttatcaataaaagggattggcccctggactatcgct
tatgcacaaatgcgcggcgcaagtcatcctgacatattgttatgcggtgatctggttgtt
aaaaagcgagtgttgtctttgtatcagcagcatcaacaagatgcaggggaaatagacgca
atagattaccctgcgttaaccaaggatataactaaaaccatcagcccttggggaagttac
ttaacctttcagttgtggaatttatcatga
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