Shewanella piezotolerans: swp_1707
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Entry
swp_1707 CDS
T00791
Name
(GenBank) NifR3/Smm1 family protein
KO
K05541
tRNA-dihydrouridine synthase C [EC:1.-.-.-]
Organism
swp
Shewanella piezotolerans
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
swp03016
]
swp_1707
Transfer RNA biogenesis [BR:
swp03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
swp_1707
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dus
FMN_dh
Nuc_deoxyri_tr2
His_biosynth
Motif
Other DBs
NCBI-ProteinID:
ACJ28479
UniProt:
B8CMX7
LinkDB
All DBs
Position
complement(1759454..1760389)
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AA seq
311 aa
AA seq
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MEGVVDDLMREILSAINPYDLMVTEFVRVVDQLLPEKVFYRICPELKTNGETASGTPVRV
QLLGQEPGWMAENAIRAIEMGSKGVDVNFGCPAKMVNRSNGGAVMLQYPEQLYNVVKAMR
EAVPEQHPVTAKIRLGFNDKSLYMENAQAIYEAGASELAVHARSKVDGYKPPAYWEYITD
INAKLPIPVIANGEIWNVDDARRCMELTGCDSIMVGRGAISLPNLAASIKGAAPYTWQQS
LALMLEYTNRELVARKSTYYPARIKQWFNYLNRQYPEADTLFRELRIFKTAEEIIHVLQT
ANTNLYHQQLD
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgttgttgatgatttaatgcgtgaaattctttctgctattaatccctacgat
ttaatggtgaccgaatttgtacgtgtcgttgatcagttattgccagagaaagtgttttat
cggatctgtcctgagcttaaaaccaatggtgaaacggcatcaggaacgcctgttagagtg
caattactaggtcaagagcctggttggatggcagaaaatgctattagagcgatagagatg
ggctcaaaaggggttgatgttaattttggctgccctgccaaaatggtcaatcgcagtaac
gggggagctgtaatgctgcaataccctgaacagctctataacgtagttaaggccatgcgt
gaggcggtaccagagcagcatcctgttaccgctaaaatccgtcttggttttaacgataag
tctctttatatggaaaatgcccaagcaatatatgaagcgggggcgagtgagctcgcagta
catgcaagaagtaaagttgacggttataaaccaccagcttactgggagtacatcaccgat
ataaatgcaaagctgcctattccggtgattgctaatggtgagatatggaatgtcgatgac
gcacgtcgttgtatggagcttaccggttgtgacagcatcatggttggtcgcggcgcgata
tcattacctaacttggctgcaagtattaaaggtgcagcgccttacacatggcagcaatca
ttggcattgatgcttgagtacaccaatcgcgaacttgtcgcccgtaaaagtacctattac
ccagctagaattaaacagtggttcaactacctcaaccgccaatatcctgaagctgatacg
ctatttcgtgagcttaggatctttaagacagctgaagaaattattcatgttctgcaaacc
gctaataccaatctgtaccatcaacagcttgattaa
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