Shewanella piezotolerans: swp_1716
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Entry
swp_1716 CDS
T00791
Name
(GenBank) DNA-directed DNA polymerase
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
swp
Shewanella piezotolerans
Pathway
swp03030
DNA replication
swp03430
Mismatch repair
swp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
swp_1716
03430 Mismatch repair
swp_1716
03440 Homologous recombination
swp_1716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
swp03032
]
swp_1716
03400 DNA repair and recombination proteins [BR:
swp03400
]
swp_1716
Enzymes [BR:
swp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
swp_1716
DNA replication proteins [BR:
swp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
swp_1716
DNA repair and recombination proteins [BR:
swp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
swp_1716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_16
AAA_5
AAA_14
AAA_2
PIF1
AAA_30
TsaE
AAA_assoc_2
AAA_18
AAA_7
RCF1-5-like_lid
Motif
Other DBs
NCBI-ProteinID:
ACJ28488
UniProt:
B8CMY6
LinkDB
All DBs
Position
1764512..1767352
Genome browser
AA seq
946 aa
AA seq
DB search
MSYQVLARKWRPAKFEQMVGQSHVLHALTNALTQQRLHHAYLFSGTRGVGKTSLARLFAK
GLNCEQGVTATPCGQCSACVEIAEGRFVDLIEVDAASRTKVDDTRELLDNVQYRPSRGRY
KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQRLPVTVLSRCLQFNLKSLTQ
DEISDQLTNVLTAESLEFEATALTLLAKAANGSMRDALSLTDQAIAFGAGQVKLELVQTM
LGSIDEKQVIALLEALAKADVMALMQVSAGVLSFGAEPEEVLRSLLELLHQITLTQFAPA
AAQMSLYSEQIKAFAQQLSPEQVQLYYQLLLTGRKDLPHAPDPKSGLEMALLRAVTFVPE
QPVSKWVTDSPAAIAIPQAAAPAITQSSESAKPQAIVAPQQEVKAAPVEEAAEKKTVLTA
NSVNDKQPNQDPVAADTLKPELAAIEASVGAPVSSTLESMNSEMAVILSQAQSQGFSSSD
TSETKDISTEQTQSEVKPPVKAQQPADTSTSDDATEISSIAEQLPKPSDIDSNLNNTVVD
NASVKLEAQKGQQVQDSQFDGDDDLAAYSQYAGAYDTDIDDSDFDFALEQSEPLAQDITD
RRQNAAQSAAISTSLVPSQLESQPSAEASSASDDILDAVLAARDSLLDGIGEEDPQESSA
KKSVAERKPFAPPVRKPKAEPEIDNSDPATVGAKSDQAQENIKAANADNQEETFDRPPWE
EPHAQDPTPRFDDVAVEKEANKAADNAAVEPKRTPQPQNQTEQQSKPPVTSLDSTSVQDV
ELNLPALPSGEITGNDIDLKWYRFMADLEVGGRVRQLAVNSVCHQFEQPLSLLLKPDQKH
LGADVAIKQLEEAMSKALGEPSEVRISVGVDSSRETPLEVRRRFHKEILAQAHHGMITDD
NVRWLSENMGAQLTPDSLSYAPELLVNKGKSIELVDMSNFKRLPES
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatcaggtgttggccagaaagtggcgccctgctaaatttgagcaaatggttggt
cagtcgcatgtcttacatgccttaaccaatgcgctcactcagcaaagattgcatcatgct
tatctgttttctggcacacgaggagtgggtaaaaccagtcttgcacgtcttttcgctaaa
ggcttaaattgtgaacaaggtgttacagctacgccctgtggtcagtgctcagcgtgtgta
gaaatcgcagaagggcgttttgtcgatcttatagaagttgatgctgcatcgcgcactaaa
gttgatgatacccgtgaacttcttgataacgttcagtaccgacctagtcgtggccgttat
aaagtctacttgattgatgaagtgcatatgctgtctcgcagcagttttaatgcactgctt
aagacgctagaagagccaccagagcatgttaagtttctgctggcgacaaccgatcctcaa
cgtttgcctgtaacagtactgtcgcgttgcttgcagtttaatttaaaaagtctaactcaa
gacgaaatcagtgatcagctaactaatgtgttaaccgccgagtcactggaatttgaagcc
acagcgttaacattgcttgctaaagctgctaatggcagtatgcgtgatgcattaagctta
accgatcaagcgatagcatttggtgcaggacaagtgaaacttgaattagtgcagaccatg
cttggcagcattgatgaaaagcaggttatcgctttgcttgaagcactcgcaaaagcggac
gttatggcactgatgcaagtcagtgctggtgtattgtcttttggtgccgaacctgaagag
gtgttacgtagcttattagagttactgcatcaaattactttgacacaatttgctcccgct
gcagcacaaatgtcgctttatagtgagcagataaaagcgtttgcacagcagttatcaccg
gagcaggtgcaactgtattaccagctattactgactggacgtaaagacttacctcatgcg
ccagatcctaagtctgggcttgagatggcactgctaagagccgttacatttgtaccagag
caacctgttagcaaatgggtgactgatagtccagcagcgatagctatcccacaggcagca
gcacctgcaataacacaatcatctgagtctgctaagccgcaagcaatagttgccccacag
caggaagttaaagctgcgcctgttgaagaggctgcggaaaaaaaaacagttttaaccgct
aacagcgtcaatgataagcagccgaatcaagatccagttgctgcagatacgctaaaacct
gagttagcagccattgaagccagcgtcggtgcgcctgtatccagtacgcttgagagtatg
aatagcgaaatggcggtcatactcagtcaagcacagagccaaggcttttcaagctcagac
acttcagagactaaagatattagtactgagcagacccagagcgaggttaaaccgccagtt
aaagctcaacagcctgcagatacgagtacctcggatgatgctacagaaataagcagtatt
gcagagcaattgccaaagccaagcgacattgactcaaatttaaataacactgtcgttgac
aatgctagcgttaaattggaagcacaaaagggccagcaggttcaagatagccaattcgac
ggtgacgatgatctagctgcatactcgcagtacgcgggggcgtacgatactgacattgat
gacagcgattttgactttgcactagagcagtccgaacctttagcgcaagacatcacagac
cgcagacaaaatgcagcgcagtcagcagcaatatcgacttcactggtgcccagtcagcta
gagagtcaacccagcgcagaagctagctcggcaagtgatgacattctagatgctgtatta
gccgctagagattcattactcgacggtataggtgaagaagatcctcaggagagttcagca
aaaaagtccgtggctgaacgcaagccgtttgcaccacctgttagaaagcctaaagcagaa
cctgaaatagataatagtgatcctgcaacagttggcgctaaaagcgatcaagcgcaggaa
aatataaaagccgcgaatgcagacaatcaagaggagacttttgaccggccaccttgggaa
gaacctcacgcgcaagatccaacgcctaggttcgatgacgtagccgttgagaaagaagct
aataaagctgctgacaatgccgctgtagagcctaaacgaacgcctcagccacaaaatcaa
acagagcagcagagcaagccgcctgttacatcgcttgattcaacttcagttcaggatgtt
gagttaaacttacctgcattgcctagcggtgagataaccggtaacgatatcgatcttaaa
tggtatcgcttcatggctgaccttgaagtgggtgggcgagtaagacaacttgcggtcaac
tctgtttgccaccagtttgaacaacctttatcgttgttgctcaaaccggatcaaaagcac
cttggtgccgatgtggctattaagcagctagaagaggcgatgagtaaagcacttggagag
ccaagtgaagtgcggatctctgttggcgtcgatagctcgcgtgagaccccacttgaagtg
agacgccgctttcacaaagagatattagctcaagcgcatcacgggatgattaccgatgat
aacgtgcgctggttgagcgaaaacatgggcgcacaattaacgccagactcattatcttat
gcgccagaattgctggttaataaaggaaaatcgatagaattggtcgatatgtcgaacttt
aagcggttacctgagtcataa
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