Shewanella piezotolerans: swp_3146
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Entry
swp_3146 CDS
T00791
Name
(GenBank) TPR repeat protein
KO
K07114
Ca-activated chloride channel homolog
Organism
swp
Shewanella piezotolerans
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swp02000
]
swp_3146
Transporters [BR:
swp02000
]
Other transporters
Pores ion channels [TC:
1
]
swp_3146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_2
TPR_2
TPR_1
TPR_11
TPR_8
TPR_7
TPR_12
TPR_16
TPR_14
ANAPC3
TPR_6
TPR_17
Motif
Other DBs
NCBI-ProteinID:
ACJ29855
UniProt:
B8CPZ2
LinkDB
All DBs
Position
3298983..3300902
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AA seq
639 aa
AA seq
DB search
MHLIRPEWLLALIPLAMLLMFIKKNHGASSSWDQYIAPHLASVLLSRTDKKRSHSIAYLA
MAWCIAVVALSGPAIEKTALPVYESAQGRVIVMDMSLSMYANDLSPNRLTKSKYRATDLL
GSIAEGETGLVAYAGDAFTISPLTRDNATLLNLLPTLTPSIMPTKGSNIEAALEHAKSLL
SQSGHISGDIILFTDGISPSQLSAAQSVLKGSAYRLGVLAFGSEQGAPIKLPDGQLLRDN
ANQVVVAKTDLGLLNSLASSSHGTVISTRADGQDIAQLFDWLATTKDTKESDRQGEVWQD
LGGYIALLLLLPALLSFRHGLLGAIALVVVLQPTQPVYANSWDDLWQTQDQQAAKDYQAE
QYEAAAQKFEQAQWQASSHYKAGQYEQALTGFEQDNSANGLYNQGNALMQLGQYDKAEKR
YQDALELAPDMDSAQQNLALAKQLQQQQQQDSQGDGDNQKNSDEKQNSEDQQQKSNEQQS
DDGQQSDKESDDSSSDTDSGQGEQKQQPSDDTKSGDDANDTAEESQQSGASDAAQNEPNS
NDAPMDAKASDPQKPEDKLQENAQQANAKQASDNEDPQQGDEATSMVPATSSDEPLPPEM
ERALRAIADDPQVLLRNKMQLEYQKRRRQGINTKENQQW
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgcatttaatacgtcctgagtggctattagcgcttataccgctggctatgttgttaatg
tttattaaaaagaatcacggtgcgagttccagctgggatcaatacattgcccctcaccta
gcaagtgtattgcttagtcgcacagataaaaaacgtagccattctattgcataccttgca
atggcatggtgtatcgctgttgttgccctttctggtcccgcgattgaaaaaacggcactg
ccagtttatgagtctgcacaaggtcgagtcattgtgatggatatgtccctgtctatgtat
gccaatgacctttcacccaaccggttgaccaaatcaaagtatcgagcaacagatctgcta
ggatcgattgctgaaggtgaaacaggacttgttgcttacgctggtgatgcatttactatt
agcccgttaactcgagataacgccacgctattaaacctactgccgacattaacgccaagc
atcatgccaacaaaaggctctaatatagaagccgcgctagaacacgcaaaatccctgcta
agtcaaagcggacatattagtggcgacattattttatttactgatggcatttctccttcc
cagctcagtgccgctcaatcagtgttaaaaggcagtgcttatcggttgggagtactagca
tttggtagtgaacaaggtgcgccaattaaactacctgacggccaactgctacgtgataat
gccaaccaagtggttgttgcaaaaactgatttaggattgctaaactcattagcttcttcg
agtcacggtactgtcatctcaacacgtgcagacggtcaagatattgctcaacttttcgat
tggcttgccaccactaaagatacaaaagagagtgataggcaaggtgaagtttggcaagat
cttggcggttatatcgcattgttactgctgctgcctgcccttctcagtttcaggcatgga
ttgcttggtgcaatcgctttggtcgtcgttttacagccgacacaacccgtttacgctaac
agctgggatgatttgtggcagactcaagatcaacaagctgctaaagactaccaagccgag
cagtatgaagcggcagcacaaaagtttgagcaagctcaatggcaggcaagttctcattat
aaagcgggacaatatgaacaggcactaacagggtttgagcaggacaactctgccaatggc
ctctataaccaaggcaatgctctgatgcagcttggtcaatatgataaagccgaaaaacgc
tatcaagatgcacttgagttagcacccgatatggatagcgcacagcaaaaccttgcattg
gctaagcaattacaacagcaacagcaacaagattctcaaggcgacggtgacaaccagaaa
aattcagatgaaaagcaaaactcagaggatcaacagcaaaagagtaatgagcaacaatct
gatgacggtcagcaaagtgataaagaatccgatgacagtagttctgacactgacagtggt
cagggagaacaaaagcaacagccttcagatgacaccaaatccggcgacgatgcaaacgat
accgctgaagagtcgcagcaaagtggagccagtgatgctgcacaaaatgagcccaacagc
aacgatgctcccatggacgcaaaagcgtctgatcctcaaaaaccagaagacaagctgcag
gaaaatgcgcaacaagctaatgccaaacaagctagcgacaatgaagacccacaacaggga
gatgaagcaacctctatggtacccgcgacttcctctgatgagccattgccaccagaaatg
gaaagagctttaagagcaattgctgacgacccacaagtattactgcgtaataagatgcag
cttgaatatcaaaaacgacgccgtcaaggcattaacaccaaggaaaaccaacagtggtaa
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