Shewanella piezotolerans: swp_3178
Help
Entry
swp_3178 CDS
T00791
Name
(GenBank) Exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
swp
Shewanella piezotolerans
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
swp03400
]
swp_3178
DNA repair and recombination proteins [BR:
swp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
swp_3178
Archaeal homologous recombinant proteins
swp_3178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
ACJ29886
UniProt:
B8CQ23
LinkDB
All DBs
Position
complement(3334710..3335852)
Genome browser
AA seq
380 aa
AA seq
DB search
MKFIHTSDWHIGRQLHNQSLLDDQRYVLQQIIEIAKEQDVDALIIAGDIYDRSVPPASAV
ALLDEVLNTLVNELKISVIMIAGNHDGHERLGFASRQMQDSGLHIIGPLSASLNPIELKG
KQGNAMFYPLPYADPATVRHVFECEVSTHEEAMIKLLEQVTEHDAKELPKVVISHCFLDG
GSESDSERPISIGGADKISPSLFSDYQYTALGHLHGPQYKGSEQIRYSGSPLKYSFSEQN
QKKSVTLVEFDSTGKADISLLPLYGKRDVRIVEGLLSDILVAGQTDPNRDDYLMVRLLDK
SAILDAMGKLRAVYPNVLHLERTGLMAQNQQLDIGKEHIKKGELDMFSDFFSQVYGESLT
EKQHSAIVDTIDSLHKGEQA
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatccacacttctgactggcatattggcagacaactgcataatcagtcgcta
ctagacgatcagcgctatgtcttgcagcaaattatcgaaatagcaaaagagcaagatgtt
gatgcactgattattgcaggtgatatttatgatcgctcagtgccgccagcaagtgcagta
gcattactcgatgaagtgttaaataccttagttaacgagcttaaaatatcagtaattatg
attgccggtaatcatgatggccatgagcgattaggctttgcttcaagacagatgcaggac
agtggactgcacattattgggcctttaagcgcttcgctaaatcccattgagctgaaagga
aagcaaggaaacgctatgttttacccgcttccttatgctgatccagccacggtgcgccac
gtgtttgaatgtgaagtcagtactcatgaagaggcgatgataaagctgcttgaacaagtg
actgaacatgatgctaaagagctacctaaagtggtgatcagccactgttttttagatggt
ggcagtgaatccgattcagaaaggccaataagcatcggcggcgccgataaaatatcacca
agtttattttcagactatcaatatacggctttagggcatttgcacggacctcaatataaa
ggcagtgaacagatccgatattcaggctcgccgttgaaatattcctttagtgagcaaaat
cagaaaaagtcagtcactttggttgagtttgactcgactggcaaagcagatattagtttg
ttacccctatatggcaagcgagatgttcgcatcgttgaaggactgttatcggatatctta
gttgcgggacaaactgatcctaaccgagatgattacttaatggttcgccttcttgataaa
agtgccattctcgacgcgatggggaaattacgcgcggtgtaccccaatgtattacacctt
gagcgaactggcctaatggctcaaaatcaacaacttgatattggtaaagagcatatcaaa
aaaggtgaactggatatgttcagcgacttcttctctcaagtgtatggcgagtctttaact
gaaaagcagcacagtgcgatagtcgataccatagattccctgcataagggagagcaagca
tga
DBGET
integrated database retrieval system
