Shewanella piezotolerans: swp_3250
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Entry
swp_3250 CDS
T00791
Name
(GenBank) Helix-turn-helix, Fis-type
KO
K03974
psp operon transcriptional activator
Organism
swp
Shewanella piezotolerans
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
swp03000
]
swp_3250
Transcription factors [BR:
swp03000
]
Prokaryotic type
Other transcription factors
Others
swp_3250
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
HTH_8
AAA_2
Mg_chelatase
AAA
bpMoxR
HTH_28
AAA_16
HTH_23
AAA_7
AAA_22
AAA_14
HTH_Tnp_ISL3
nSTAND3
Guanylin
Motif
Other DBs
NCBI-ProteinID:
ACJ29954
UniProt:
B8CRE6
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All DBs
Position
3405973..3407031
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AA seq
352 aa
AA seq
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MTNQFQQDNLIGQSNALLEVLEHISQVAPLSKPVLIIGERGTGKELIAERLHYLSKRWDQ
SFIKLNCSSLSENLLESELFGHDAGAFTGANKKHEGRFERANGGTLFLDELANTSGLIQE
KLLRVIEYGEFERVGGNKTVKTDVRLICAANEDLPSLAEAGEFRADLLDRLAFDVITLPP
LRHRTEDIMPLAEYFAVGMARQLKLELFEGFSPRAVQQLMEYRWPGNIRELKNVAERSVY
RNAETGKAIDDIILDPFASPYRPTTRVKTKERQQIADTPVASVAPESSKSTNICEPMSFP
IDFKTHCEEQEVNLLKQALEAGQFNQKKTAELLGLSYHQLRGILKKYNLLDK
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
gtgactaatcaatttcagcaagataatcttattggccaatctaatgctttgttagaggtc
cttgaacatatttctcaagtggctcctttgtctaagccagtgctaatcattggtgagcga
ggcacgggtaaagagctaatagccgaacgtttgcattatctttcaaagcgttgggaccaa
agttttatcaagcttaactgctcttcgttgagtgagaatctgctcgaaagcgaactattt
ggccatgatgctggagcatttacgggcgcaaataaaaagcatgaaggtagatttgagcgt
gcaaatggtggaaccctattcttagatgagctggcaaatacctctggccttattcaagaa
aagctattgagagttattgaatatggtgaatttgaacgagttggtggtaataaaaccgtt
aaaaccgatgttaggcttatttgtgccgcaaatgaagatctgccctctttagcagaagcc
ggtgagtttagggccgatctgttagataggctcgcctttgacgtcatcaccctaccacca
ctacgtcaccgaactgaagatattatgcctctcgctgaatactttgccgttggcatggcg
agacaactaaaattggagctatttgaaggttttagcccacgtgcagtgcaacagttaatg
gagtaccgttggccaggtaatattcgagaattgaaaaacgttgcagagcgcagtgtttac
cgcaatgctgagacaggcaaagcaattgatgacatcattttagatccatttgcttcccct
tatcgaccgacgacaagggtaaaaaccaaagaaagacagcaaatagccgatactcctgtt
gctagcgtagcgcccgaatccagcaaaagtaccaatatctgtgagccgatgagcttccct
atcgactttaaaactcattgtgaagagcaggaagtgaatttactcaagcaggcattggaa
gcgggtcaatttaatcagaaaaaaaccgcagaactactgggcttgagctaccaccaactt
cgtgggatcttaaagaaatacaacttactggataaataa
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