Shewanella piezotolerans: swp_3254
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Entry
swp_3254 CDS
T00791
Name
(GenBank) Oligopeptide/dipeptide ABC transporter, ATP-binding protein
KO
K19229
cationic peptide transport system ATP-binding protein
Organism
swp
Shewanella piezotolerans
Pathway
swp01503
Cationic antimicrobial peptide (CAMP) resistance
swp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
swp_3254
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
swp_3254
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swp02000
]
swp_3254
Transporters [BR:
swp02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Cationic peptide transporter
swp_3254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
DUF3368
Motif
Other DBs
NCBI-ProteinID:
ACJ29958
UniProt:
B8CRF0
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All DBs
Position
3410639..3411646
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AA seq
335 aa
AA seq
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MPLLDIRNLTIELDTPHGRVKALERVSLTINPGELHGLVGESGSGRSLLARAILGVPGHN
WTITADRMMWDGQNLMEMSTKQRRNLMGSEIAMIFQDPTSSLDPAISVGSQIIEAMPIDK
SLPFWKRGKVRKKNAEKWLHKVGIKNTDKVMESYAWELSEGECQKVMIAMAVANQPRLLI
ADEPTDSMELSTQAQIFRLLSKLNQLQNVSILLISHELETLSGWCDQLTVLYCGQVMESG
PTSELIAQPFHPYTKALVENAPDYSGELPHKSMMQTLPGSAPALQHLPIGCRLGPRCPQA
QKKCVGQPSLCHKKDRYFACHFPYHNESCNDDTSS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttctcgacattagaaacctcaccattgaactagatactccccatgggcgcgtc
aaggctttagaacgagtgtctttaaccattaaccctggtgagctacatggtttggttgga
gagtctggctctggacggagcttattggctagagcgatattaggcgtaccgggtcataat
tggaccattaccgctgatcgtatgatgtgggatggacagaacttaatggagatgtccacc
aagcaacgacgcaaccttatgggcagtgagattgcaatgatctttcaggacccaaccagt
agtttagaccccgccatttctgtaggcagccaaattattgaagctatgcccatcgataaa
agtttaccattttggaaacgcggcaaggttcgtaaaaaaaatgctgaaaagtggctccat
aaggtagggattaaaaacactgataaagtcatggaaagttatgcttgggaactctcagaa
ggagagtgccaaaaagtaatgatcgcaatggctgttgctaaccagccacgattactgata
gctgatgaaccaaccgactcaatggagctcagtacccaggcgcaaatttttcggttattg
agcaagctcaaccagctgcaaaatgtatccattttattgataagccatgagttagaaacc
ttatcaggctggtgcgatcaattaacggtactgtattgtggtcaagtgatggaatcgggt
ccaacatctgaattaattgcacagccatttcatccttacactaaagcgcttgtggagaat
gcaccggattattctggagagttaccccataaatctatgatgcaaacattgccaggctct
gcacccgctttgcagcacttaccgattggttgccgtttaggtcctcgctgccctcaagcg
cagaaaaagtgtgttggccaacctagcctatgtcataaaaaagatcgctatttcgcctgc
catttcccataccataatgagtcttgtaatgacgacacctcttcttaa
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