Shewanella piezotolerans: swp_3258
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Entry
swp_3258 CDS
T00791
Name
(GenBank) Histone-like bacterial DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
swp
Shewanella piezotolerans
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
swp03032
]
swp_3258
03036 Chromosome and associated proteins [BR:
swp03036
]
swp_3258
03400 DNA repair and recombination proteins [BR:
swp03400
]
swp_3258
DNA replication proteins [BR:
swp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
swp_3258
Chromosome and associated proteins [BR:
swp03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
swp_3258
DNA repair and recombination proteins [BR:
swp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
swp_3258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ACJ29962
UniProt:
B8CRF4
LinkDB
All DBs
Position
complement(3416652..3416924)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIEKIASGADISKAAAGRALDSFIGAVTDGLKEGDKIALVGFGTFEVRQRAERTG
RNPQTGKEIKIAAANIPAFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatctgaactaatcgagaaaatcgcttctggtgctgacatttctaaagccgct
gctggccgtgcattagattctttcatcggcgctgttactgacggcctaaaagaaggcgat
aagattgctcttgttggtttcggtactttcgaagtgcgtcaacgtgcagagcgcactggt
cgtaaccctcaaacgggtaaagagatcaagatcgctgcagcaaacattccagcattcaaa
gctggtaaagcgcttaaagacgctgttaactaa
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