Shewanella piezotolerans: swp_3473
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Entry
swp_3473 CDS
T00791
Name
(GenBank) Histone-like nucleoid-structuring protein H-NS
KO
K03746
DNA-binding protein H-NS
Organism
swp
Shewanella piezotolerans
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
swp03036
]
swp_3473
03400 DNA repair and recombination proteins [BR:
swp03400
]
swp_3473
Chromosome and associated proteins [BR:
swp03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
swp_3473
DNA repair and recombination proteins [BR:
swp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
swp_3473
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
STELLO
Hemagglutinin
NPV_P10
Motif
Other DBs
NCBI-ProteinID:
ACJ30169
UniProt:
B8CS11
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All DBs
Position
3672245..3672637
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AA seq
130 aa
AA seq
DB search
MSEFLDILTHGRRFKAAVKELSLEDLKDVSVKLEKIIDEKASQAEAESEAMAERNAKIEE
IRKQMEAIGLSVDDIGGAGVKPAPKKRAPRPAKYQIEVNGEMVQWTGQGRMPTVFKNELE
NGRTMEDFLI
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaatttttagatattttgacccacggtcgtcgttttaaagctgctgtaaaagag
ttgtctcttgaagacttaaaagacgtttcagtaaagcttgaaaaaatcatcgatgaaaaa
gcatctcaagctgaagcagaaagcgaagcaatggctgagcgtaatgctaaaattgaagaa
attcgtaagcaaatggaagccattggcttatcagttgatgatattggtggcgcgggtgtt
aaaccagctcctaagaaacgtgctccacgtcctgctaaataccaaatcgaagttaacgga
gaaatggttcaatggacagggcaaggacgtatgccaaccgtatttaaaaatgaattagaa
aatggccgtactatggaagacttccttatctaa
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