Shewanella piezotolerans: swp_3490
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Entry
swp_3490 CDS
T00791
Name
(GenBank) Branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding, putative
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
swp
Shewanella piezotolerans
Pathway
swp00061
Fatty acid biosynthesis
swp00071
Fatty acid degradation
swp01100
Metabolic pathways
swp01212
Fatty acid metabolism
swp02024
Quorum sensing
swp04146
Peroxisome
Module
swp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
swp_3490
00071 Fatty acid degradation
swp_3490
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
swp_3490
09145 Cellular community - prokaryotes
02024 Quorum sensing
swp_3490
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
swp01004
]
swp_3490
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
swp04147
]
swp_3490
Enzymes [BR:
swp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
swp_3490
Lipid biosynthesis proteins [BR:
swp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
swp_3490
Exosome [BR:
swp04147
]
Exosomal proteins
Exosomal proteins of breast milk
swp_3490
Exosomal proteins of breast cancer cells
swp_3490
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ACJ30184
UniProt:
B8CQ54
LinkDB
All DBs
Position
complement(3688387..3690351)
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AA seq
654 aa
AA seq
DB search
MKTANEGAASRFDMGDMDTFPKILRHNALLWSDDIAMREKEFGIWSEFSWLDYHNRVKWL
SLTLRDLGIEAETTIALLGDNRPEWVWGEVAAHALCCFSLGIYQDSLHEEVAYLLNRSNA
QVVIAEDEEQCDKLLELGDQIPSVKYIVYCDPRGMRKYDDPRLINIEDIYKSGQQLDKQH
PTAYDELVDAGKADNIAIYCTTSGTTSKPKIVLLQGSKFIDHCCSYLRADPRMPGDNYVS
VLPLPWIMEQVYAVGQALIARQIVNFVEEQETMMADLREIGPSFVLLAPRVWEGILADVQ
ARMMDSTPLKKKLFEFAMKRAEAALAQGKRSTLADILLMKALRDRLGFSFLKSAATGGAA
MGPDTFKFFQSIGVPLRQLYGQTEMCGAYTIHHQDDVDYDSVGVAFDTAELQVINTDSEG
VGEVIAKTVGMFNGYLGDQAAFDEDVKEGWMHTGDAGYFKPSGHLVVIDRIKDLAKTSHG
IQYSPQYIENKLKFSSFIGEAVILGKDKPFLSAILCIRFSIVSKWAEQQGLAFTNYTNLS
TLPEVYEQLTKEVEIVNQSLPDAQKINKFILLYKELDADDGELTRTRKVRRGVIADKYAD
IIDSLYSDKPHVDIDTVITFQDGSQSRIQTQLKVATVIESSVATQSSISQRRAS
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactgcaaatgaaggagctgcaagccgcttcgatatgggagacatggataccttt
cccaaaatattgcgccacaatgcgctgctatggagcgatgatattgccatgcgtgaaaaa
gaatttggcatctggagcgagtttagctggctcgattaccataaccgggttaagtggctg
tctttgaccctgcgtgatttgggcattgaagccgaaacaaccattgcgctattaggcgat
aaccgacctgagtgggtttggggcgaagttgcagctcatgccttgtgttgtttctcttta
gggatctatcaagactcgctgcatgaagaggtggcatacctgcttaaccgcagtaatgcg
caggtggtgattgctgaagatgaggagcagtgcgataagttactcgagcttggtgatcaa
atcccttcagtaaaatacattgtctattgcgatcctcgaggaatgcgtaagtacgacgac
ccgcgattgataaacatcgaagatatttacaagagtggacagcagcttgataaacaacac
ccaacagcttatgacgagttagtcgatgcgggaaaagccgacaatattgccatttactgc
accacatctggcacgacctcaaaacccaaaattgtattgttgcagggcagtaagtttatt
gaccactgctgctcatacttgcgtgccgacccaagaatgcctggcgacaactatgtatcg
gtattgcctctgccttggatcatggagcaggtgtatgctgtcggccaagcactgattgcc
agacagatagttaactttgtagaagaacaagagaccatgatggctgatcttcgtgaaatc
ggtccaagctttgtattactcgcgccgagagtgtgggaagggatcttagctgacgtacaa
gcgcggatgatggactcgacgccattgaagaaaaagctatttgagtttgcgatgaaacgc
gcagaggcagcacttgctcaaggtaagcgctcgacgttggcggatattctattaatgaaa
gcgctgcgcgataggcttggcttttcattcctaaaatctgcggcaaccggtggagcagct
atgggcccagataccttcaagtttttccaaagtattggggtgccactgcgccagctatac
ggtcaaacagagatgtgcggtgcttacaccatccaccatcaagatgatgttgactatgac
agtgttggtgttgcttttgataccgccgagctgcaggtgattaataccgacagcgaaggc
gtcggtgaggttatcgctaaaacggtgggtatgttcaatggttacctaggtgaccaagcg
gcttttgatgaagacgtaaaagagggctggatgcacaccggagatgctggttattttaag
ccttcgggacatttggtggtcatcgaccgaattaaagatctggctaaaaccagccatggg
atccagtactcgccacaatatattgaaaacaagcttaagttctcttcgttcatcggtgaa
gcggtgattttaggtaaagacaagccgttcctatcagccattctttgtattcgtttcagt
attgtttctaagtgggcggaacagcaaggactggcatttaccaactacaccaatctgtca
accttgccagaggtttatgagcaactgactaaagaggtagaaatagttaatcaatcgctc
cctgatgctcagaagatcaataaattcatcctgctatacaaagagctcgatgctgatgac
ggtgaactgactcgtacccgtaaagttcgccgaggtgtcattgctgataaatatgctgac
attatcgactcactctatagcgataaaccccatgttgatatcgataccgtgattaccttc
caagatggcagtcaatcgcgcattcaaacccaactgaaggtggcaactgttattgaatct
tcagtggctactcaaagcagtatttctcaaaggagagcgtcatga
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