Shewanella piezotolerans: swp_3548
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Entry
swp_3548 CDS
T00791
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
swp
Shewanella piezotolerans
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swp02000
]
swp_3548
Transporters [BR:
swp02000
]
Other transporters
Pores ion channels [TC:
1
]
swp_3548
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ACJ30240
UniProt:
B8CQB0
LinkDB
All DBs
Position
3751369..3754275
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AA seq
968 aa
AA seq
DB search
MFLNSKLASSVKLAISVGLTASLAMPAFAEEETTEEQIERVAVTGSRIAKAELTQPAPVV
SLSAEELAKFGNSDIASVLAELPSIGATNTIIGNNNSNESAGVSSADLRRLGANRTLVLV
NGKRHVAGEPGSAQVDLSTIPTSMVSRIEIVTGGASAIYGSDAVSGVINIILKNNFEGFE
FNARTSGSLEGVGTQDHSFDVLGGANVADGRGNVTFFAGYERTKEVMSTEIRQFDAWGTI
ANPENGGEEDGIPDRLRVPRVYSEMINDTGVINAFGGGIGRSTFDQNGNPIAQAERDGSN
SFAFGNFPDGCDTCFNTESYENYIPAVERINVGSTFNYDFTDEIQFYTDFRYVKSDIKQQ
FQPSFRFGNVSINVQDNAFLNEDLRQSLLDGGQTNATFAKFFDELGNRSAENRRELFRYV
GGFKGGFELSETIFDYDLYYIYGETNNRRKTLNDLIPDNFVAALDSVIDPDTGLAACRSQ
VPSAQGDDYTDPASVNGGDCVAYNPFGLGQASAEARDWVSADVTREDKITQQVIGGTLAG
DSEELFELQGGPVAMVVGFEYREETSGSTTDEFTKAGFLTNAATPDSFGEYDVSEYFVEL
NLPILKDLPFAHEFSLDGAYRKADYSHAGKTEAWKVGMFYAPLEQISIRGTIGEAVRAPN
IAEAFSPRSPGFGRVSDPCDADNINDDPDRPANCAALGIPPGFQANDNVSVDTISGGNPD
LKPESSTSYTGGIVWTPTFADSLSFTVDYYDIEIEDAIISVATQTVADNCVDATGAPDPD
FCSQVDRNPTTFDIELVRSGYLNAAAIYTSGIEFQGAYALDLESFNMPGEFRFNLLANQL
LKLEHLEFQNRPDEVNDEKGEVGDPELQFRFGMDYRLDDLTVSWNTRYIDNVVTYDVSEN
GGSLEDLSPGTIGSMTTHDLSATYYISENVMINGGVRNLFDALPPGYTANAMYDLVGRRA
FFGLKVMM
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgaattctaaactagcaagctcagtaaaactggctatatcagtaggcttaaca
gcctcactggcaatgcctgcttttgctgaagaagaaacaacagaagaacaaatagaaaga
gttgcagttactggatctcgaatagcaaaagctgaacttactcaaccagctcctgttgtt
agcctttctgcagaagaactagccaaatttggtaattcagacattgcaagtgtcttggcg
gaactgccttcaattggtgcaacaaataccatcattggtaacaataatagtaatgaaagt
gctggtgttagttcagccgatttacgtcgactgggcgcgaacagaacgttagtattagtc
aacggtaagcgtcatgtagctggtgagccaggttcagcgcaagttgatttatcaacaatc
ccaacaagtatggtatcacgaatagaaattgttactggtggtgcatcagcaatttatggt
tctgatgcggtatctggtgtaataaacattattctaaaaaacaattttgaaggctttgaa
ttcaatgcccgcacaagcggttcacttgaaggcgtaggcacgcaagatcactcctttgat
gtactaggtggtgcaaacgttgcagatggacgtggtaacgtaactttcttcgctggttat
gaacgaacaaaagaagtaatgtctaccgaaatccgtcaatttgatgcatggggaacaatt
gcaaacccagaaaatggcggtgaagaagacggcattccagatagacttcgtgttccacgc
gtttattcagaaatgatcaatgataccggtgttatcaatgcgtttggtggcggcattggt
cgatcaacatttgaccaaaacggtaacccaattgcccaagcagaacgagatggtagcaac
agctttgcatttggtaatttccccgatggctgtgatacttgttttaacacagaatcatat
gaaaactatattccagcagtagaaagaattaacgtcggttctacgtttaactacgacttt
actgatgaaattcaattctatactgattttagatatgtaaagtcagatattaaacaacaa
ttccaaccatcattccgttttggtaacgtaagcatcaacgttcaagataatgcatttttg
aatgaagacttgcgccaatcgttattggatggcggccaaacaaacgcgacatttgctaag
ttcttcgatgagttaggtaaccgctctgcagaaaaccgtcgtgaacttttccgttatgtc
ggcggtttcaaaggtggcttcgagctaagcgaaactattttcgattacgacctttactat
atatatggtgaaacaaataaccgtcgtaagacacttaatgatctgatcccagataatttt
gttgcagcgcttgattcggttatcgatccagatacaggtttagctgcatgtcgttcacaa
gttccaagtgcacaaggtgatgattatactgacccagcctctgttaacggcggtgactgt
gttgcgtacaatcctttcggcttaggccaagcgtcagctgaagctcgcgattgggtttct
gcagatgtgactcgtgaagataaaattactcaacaagtgattggtggtactttagctggt
gactctgaagagttatttgagcttcaaggtggtccagtagctatggtagttggttttgag
taccgtgaagaaacatcaggttcaacaactgatgaatttactaaagcgggcttcctaact
aacgcagcaacacctgattcattcggcgaatatgatgttagcgaatactttgtcgaattg
aatttaccaatccttaaagatctaccttttgcacatgaatttagtttagacggtgcttac
cgtaaagcagattactcacatgctggtaagactgaagcatggaaagtaggtatgttttat
gcgccattagagcaaatatctatccgtggtacaattggtgaagctgttcgtgcaccaaac
attgcagaagcattcagccctcgctcaccaggcttcggtcgagtttctgatccatgtgat
gcagataacattaatgacgatccagatcgtcctgcaaactgtgcggcactaggtattcca
cctggattccaagctaatgataacgtaagtgttgataccatctctggtggtaaccctgac
cttaagccagagtcatcgacttcatatactggtggtatagtctggacacctacatttgct
gatagcctttcatttactgtcgattattatgacattgaaattgaagatgccatcatctct
gtagctacacagacggttgcagataactgtgttgatgcaactggcgctccagacccagat
ttctgtagtcaagttgatcgtaaccctacaacctttgacattgaacttgttcgttctggt
tacctaaacgcagctgcaatttacaccagtggtattgagttccaaggtgcttatgcatta
gacctcgagtctttcaatatgccaggtgagttccgctttaaccttcttgctaaccaacta
cttaaattagagcatcttgagttccagaatcgccctgatgaagtaaatgatgaaaaaggt
gaagttggcgaccctgagctgcaattccgcttcggtatggattatcgtttagacgatcta
actgtaagttggaatactcgttatattgataatgtagtgacttatgatgtgtctgaaaat
ggtggttctctagaagacctatcaccaggaactatcggttccatgacaactcacgatcta
agtgcgacttactatatctctgaaaatgtaatgattaatggtggcgtacgtaacttgttt
gatgctctacctccagggtacacagctaatgcaatgtatgacctagttggtcgtcgcgca
ttctttggccttaaagtaatgatgtaa
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