Shewanella piezotolerans: swp_3746
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Entry
swp_3746 CDS
T00791
Name
(GenBank) Endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
swp
Shewanella piezotolerans
Pathway
swp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
swp_3746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
swp03400
]
swp_3746
Enzymes [BR:
swp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
swp_3746
DNA repair and recombination proteins [BR:
swp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
swp_3746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Mce4_CUP1
Motif
Other DBs
NCBI-ProteinID:
ACJ30428
UniProt:
B8CSD8
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All DBs
Position
3960989..3961843
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AA seq
284 aa
AA seq
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MQPHHLIGAHVSASGGIANAPLNAASIGANAFALFTKNQRRWVSKPLDEAQIALFQQNCA
EANISMDAILPHDSYLINLGHPDDELLTKSREAFYDEIARCEQIGLTLLNFHPGSHLRQI
DTDKCLSRISESINFALSQSTTVTAVIENTAGQGSNLGHSFEQLAQIIDGVEDKSRVGIC
IDTCHMFAAGYDIRSQASCLSAFDLFDKVVGNRYLKAMHLNDSKTKLNSRVDRHESLGKG
EIGAEAFSTLMTLEAVKGIPLILETTDADLWAAEINWLRSLVPK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccacatcaccttattggcgcccatgtcagcgcttcaggcggaatagcaaatgcg
ccactaaacgccgcttccatcggtgccaatgcttttgcactctttaccaaaaatcaacgt
agatgggtaagtaaacctttagatgaagcgcagattgcactgtttcaacaaaactgtgca
gaagctaatatctcaatggatgcgatcctcccccatgacagttaccttataaacttaggc
caccccgatgatgagttgcttacaaagtcgagagaagccttctatgacgaaatcgcaagg
tgcgaacagataggcttaactctgcttaactttcaccctggcagtcatctgaggcagata
gacacagacaagtgcttatcgcgtattagtgaatcgataaactttgcactatcgcagtca
actacagtcactgctgtcatcgaaaatactgcaggtcagggctctaacctaggccatagc
ttcgaacagctggcgcagataattgatggggttgaagataagtcacgagttggcatctgc
attgatacttgtcatatgtttgcggcgggctatgatattcgcagtcaagcgagctgtctg
tcagcatttgatctgtttgataaagttgtcggtaaccgctatttaaaggcaatgcatcta
aacgacagcaagactaagcttaatagtcgagtagatcgccatgaatcattaggaaaaggg
gaaataggcgcagaggcattttcaactttaatgacgcttgaagcagtaaaagggatccca
ctgattttagaaacgacagacgccgatctatgggcggctgaaattaactggctacgtagc
ttagtgccaaaataa
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