Shewanella piezotolerans: swp_3799
Help
Entry
swp_3799 CDS
T00791
Name
(GenBank) Transcriptional regulator, LysR family
KO
K04761
LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
Organism
swp
Shewanella piezotolerans
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
swp03000
]
swp_3799
Transcription factors [BR:
swp03000
]
Prokaryotic type
Helix-turn-helix
LysR family
swp_3799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HU-CCDC81_euk_2
HTH_30
Motif
Other DBs
NCBI-ProteinID:
ACJ30479
UniProt:
B8CQL3
LinkDB
All DBs
Position
complement(4012120..4013049)
Genome browser
AA seq
309 aa
AA seq
DB search
MSLVICFMKHLPSLKNLFYLVNLHQEQNFNRAAKICHVSQSTLSSGIQNLEEQLGHQLIE
RDHKSFIFTAIGEEVVLRSRKLLTDVDDLVELVKHQGEPMTGEIRLGCIPTIAPFLLSRV
VQHCKEVYPNLTLFLKEDTTDRLVDALGKGELDLLLLALPVDTSGYHSMKVGIDPFKMVV
HEDLSDAIHEPIDYQDLPDESIFLLQAEHCITGHAISACQLGESTKINPFAATSLHTLVQ
MVNCKLGTTFLPQMAIDAGILNNTELTTMAPPSDTPYRDIGLVWRQTSSRILTFRTLGLE
IQKLLEQHN
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgtcattggtaatctgctttatgaaacatcttcctagtttaaaaaacctgttttatttg
gttaatttacatcaagaacaaaattttaatcgcgctgcaaaaatttgtcatgttagccag
tcaacgctatctagtggtattcaaaacctcgaagagcaattaggtcaccagttgatcgaa
cgcgaccacaaatcttttatctttaccgctattggcgaagaggtggtgttacgttcacgc
aagttactcactgatgtggatgatttggtcgagcttgttaagcaccaaggtgagcctatg
acgggcgaaatccgtttgggttgtattccaactattgcgccttttcttctcagtcgagtg
gttcagcattgcaaagaggtttatccaaatctcactctgttcttgaaagaggataccact
gataggttggtagacgcgcttggtaaaggtgagctggatctgttgttgcttgccttgcca
gtggatactagtggttaccacagtatgaaagtgggtatcgacccgttcaaaatggttgtg
catgaagatctcagtgatgcgattcatgaaccgattgattatcaagatctgccagacgaa
agtatctttttattgcaggctgaacattgtattactgggcatgctatcagtgcttgtcag
ttaggggaaagtaccaagattaatccgtttgcagcaacgagtttacataccttggtacag
atggtgaattgcaaattaggaaccacattcttgccacaaatggcgatagatgccgggata
ttaaacaatacagaactgacgactatggcgcctcctagcgatacaccatatagagacatc
ggccttgtttggcgtcagacctcgagccgtattctgacatttagaacactaggcttagag
atccaaaagctgcttgaacaacataattaa
DBGET
integrated database retrieval system
