Shewanella piezotolerans: swp_3965
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Entry
swp_3965 CDS
T00791
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
swp
Shewanella piezotolerans
Pathway
swp00061
Fatty acid biosynthesis
swp00071
Fatty acid degradation
swp01100
Metabolic pathways
swp01212
Fatty acid metabolism
swp02024
Quorum sensing
swp04146
Peroxisome
Module
swp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
swp_3965
00071 Fatty acid degradation
swp_3965
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
swp_3965
09145 Cellular community - prokaryotes
02024 Quorum sensing
swp_3965
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
swp01004
]
swp_3965
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
swp04147
]
swp_3965
Enzymes [BR:
swp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
swp_3965
Lipid biosynthesis proteins [BR:
swp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
swp_3965
Exosome [BR:
swp04147
]
Exosomal proteins
Exosomal proteins of breast milk
swp_3965
Exosomal proteins of breast cancer cells
swp_3965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ACJ30635
UniProt:
B8CSK9
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All DBs
Position
4182669..4184267
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AA seq
532 aa
AA seq
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MAYDSDSTLDLSRYASLNDLIELASARYSDKAAYSCLGHETTFNEINHYSRQFAAYLQQE
TNLVQGDRVAIQLPNITQFVIAAYGAIKAGMVLVNTNPLYTQRELIHQFNDSGAKALVVL
SDLLPTLTEVVANTGIETVISTHAMDLIAPQPQPEVPFATVPFCDVLSAGEKLTYAPVIS
VSGQIAALQYTGGTTGLSKGAMLTHGNLLANAMQIKSRLGDRLVEGEEIFVAPLPVYHIY
AFMVNLVLYYERGGCSVLIPNPRDISGLISTLGQYPFTGFAGLNTLFVGLCHQPEFKALD
FSHLKVTISGGTALTQAAASIWQQTTGCTISEGYGLSETSPVVSLNAPGLEQLGTIGKPV
LGTQVKILDMDDNEVPIGETGELAVFGPQVMLGYWNNPDETAKVMTSDGYFKTGDIALAT
DDGYHKIVDRKKDMIIVSGFNVYPNEVEDVLSNHEAVLECAVIGVEDERSGEAVKAVIVL
SDSNIEHEQAKAMVDKYCREQLTAYKVPKIISFVDALPKSTVGKILRRELRK
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggcatatgattcagactcgacactagacctttcacgctacgcatcgcttaatgatctg
atagagcttgctagtgcaagatatagtgataaagccgcgtactcctgcttaggccacgag
acaaccttcaacgaaattaaccactactcacgtcaatttgccgcttatctgcagcaagag
accaatctagtgcaaggtgacagagtcgcgattcaactgcccaacattacccaatttgtg
attgccgcttacggtgcaatcaaggctggcatggtgttagttaacactaacccactctac
acccaacgtgaacttatccaccagttcaatgactcaggcgcaaaagccttagtcgtgtta
tcagacttactaccgacgttaaccgaagtggtcgctaacacgggcattgaaaccgttatc
tcaacccatgcgatggacttaattgcaccgcagccgcaaccagaagtgccatttgcaacc
gtacctttttgtgatgtgctctcggcaggagagaagcttacctatgcgccggtcattagt
gtttctggccaaatcgccgcgctgcaatatacgggcggtaccactggcctatcaaaaggc
gcaatgctgactcatggcaatctactcgccaatgcaatgcagataaaatcccgcttaggc
gataggttagtggaaggggaagagatatttgtcgcaccgctccctgtgtaccacatctac
gcctttatggtgaatttggtgctctactatgaacgcggcggctgctcagtacttattccc
aacccacgtgatatttcaggattaatatccaccttaggacaatatccttttactggcttt
gcagggctcaatactctatttgttggcctctgtcatcagcccgagtttaaagcattagat
tttagccatctaaaggtcactatctcaggtggcacagcacttacccaggccgccgccagt
atttggcagcaaactactggctgcactatctcagaaggttatggattatcagaaacctcc
ccagtagtttcactcaatgccccaggacttgagcaactcggtaccataggtaaacccgtt
cttggtactcaagttaagatcctagatatggatgataatgaagtgcctatcggtgaaaca
ggcgaacttgccgtctttggcccacaagtgatgttaggttattggaataatcccgatgaa
accgccaaggtgatgaccagtgatggttactttaaaactggcgatattgccctagcgaca
gacgacggttaccacaaaattgttgatcgcaaaaaagacatgataatcgtttcaggcttt
aacgtttaccctaatgaagtcgaagatgtgttatctaaccatgaagccgtactcgaatgc
gccgtcatcggtgtcgaagatgagcgcagcggcgaagcagtaaaagcggttatcgttctc
agtgacagcaatatagaacacgagcaagcaaaggcaatggtcgacaagtactgccgtgaa
caactcacggcatataaagtccctaagatcatcagctttgttgacgccctacctaaatca
accgtagggaaaattctgcgcagagagctgcgtaagtaa
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