Shewanella piezotolerans: swp_4113
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Entry
swp_4113 CDS
T00791
Name
(GenBank) ABC transporter, transmembrane region:ABC transporter
KO
K24821
ATP-binding cassette, subfamily B, heavy metal transporter
Organism
swp
Shewanella piezotolerans
Pathway
swp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
swp_4113
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swp02000
]
swp_4113
Transporters [BR:
swp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
swp_4113
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC_ATPase
AAA_22
AAA_29
AAA_21
Zeta_toxin
RsgA_GTPase
ATP-synt_ab
DUF815
DUF87
AAA
AAA_10
AAA_15
nSTAND3
AAA_23
MMR_HSR1
Septin
Motif
Other DBs
NCBI-ProteinID:
ACJ30776
UniProt:
B8CT00
LinkDB
All DBs
Position
complement(4315998..4317770)
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AA seq
590 aa
AA seq
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MRPSLYFDGPVGKLNWHVLKLLWPYLLEFKQRVGLALLCLIVAKAASVGLPFVLKALVDD
LTLDGKSALLAVPVGLVVAYGGIRLLNTIISEVRDTLFGRVTERAIRRLGIAVFEHLHRL
DMAFHLERRTGGLSRDIERGTSGVSFLMRFMVFNIVPTLLEIILVVGILFYNYGVGYAAV
TLLSVVAYGAYSVVATEWRTGYVRDAAKADSVSNTRAVDSLLNYETVKYFNNEQYEANRY
DSALADWEEAKRKNRLSLFALNAGQACIISVAMTVMLAMAANDVVQGAMSIGDFVLINAF
MMQLFIPLNFLGFVYREIRGAFANIERMFGLLDKEPLIEDIDNAKTEKLTEGVVSFEQVS
FSYDSRPILDEVSFSVKSGQKVAIVGDSGAGKSTIVKLLFRFYDVVSGVIRIDGQDIREL
SQDTLRQAIAIVPQDTVLFNDTLIENVRYGRPSATDAEIAEAIKMAHLGRFIESLPEGGE
TRVGERGLKLSGGEKQRVAIARAILKRAPILVFDEATSSLDSHSEQAILTALKEVAKGHT
SLVIAHRLSTVVDADQILVLSQGRVVETGTHTSLLNAGGLYAKLWRIQQE
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccctccttatattttgatggtcccgtcggaaagctcaattggcacgtactgaaa
ctgctttggccatacttgttagagtttaagcaaagagtggggttggcactgttatgttta
attgtggccaaggctgcgagtgtcggtttaccgttcgtattaaaagcactcgttgacgat
ttgaccctcgacgggaagagtgcccttttagctgtacctgttggtttagttgttgcctat
ggcggtattcgcctgctaaacaccatcatttcggaggtcagagacacgctatttggtaga
gtgacggagcgtgcgatacggcgcttagggatcgccgtctttgagcacttgcatcgactt
gatatggcttttcatttagaaagacgtacaggaggtttgtctcgtgatatagagcgaggc
accagtggtgtgagttttttgatgcgctttatggtgttcaatatcgtgccaacattgtta
gagattatcttggtcgtcgggatcctattttataactatggtgtcggttacgctgcagta
acgctgctttctgtggtggcttatggtgcatattccgtggtggctactgagtggcgtact
ggttatgtcagagacgcagccaaagctgattcagtttctaacacgcgcgctgtcgatagt
ctgcttaactatgaaacggtaaaatactttaacaatgaacaatatgaagccaaccgctat
gacagtgctttagcagactgggaagaagctaagcgtaagaatcgattgtcattgtttgct
ttgaatgcgggccaagcttgtattatctcagttgcgatgaccgttatgcttgccatggcg
gcaaatgacgttgttcaaggagccatgagcattggtgattttgtgctgattaatgcattt
atgatgcagctgtttattccgcttaatttcttaggttttgtttaccgggagatccgcgga
gcattcgctaatattgagcgtatgtttggcctgttagataaagagccgttgatcgaagat
atcgataatgcaaaaactgagaagctaaccgaaggtgttgtttcatttgaacaagtcagc
tttagttatgacagccggcctattcttgatgaggtcagtttctctgttaagtctgggcaa
aaggtcgcgattgtcggcgacagcggggcaggaaaatcgacaatcgtaaaattattgttt
aggttttacgatgttgtgtctggagttattcgtattgatgggcaggatattagagaatta
agtcaagatacccttagacaagcgattgcaatcgtcccacaagatacggtgttgtttaat
gacacattaattgagaatgttcgttatggacgtccatcggcaacggatgctgagattgct
gaggcgataaagatggcgcacttagggcgttttattgaaagcttgcccgaaggtggcgaa
acccgtgtaggtgaacgcggtttaaagttatctggcggtgaaaaacaacgggtagcaatt
gcccgagcaattctcaaacgggcgccaattttagtctttgatgaagcaacctcttcgctg
gatagtcattctgaacaggctatattaactgcattaaaagaggtggcgaaaggccacacg
agtttagtcattgcccacagattgtcgactgtggttgatgctgaccaaatactggtgctt
agtcagggacgggtggtcgaaactggcacccatactagtttgcttaatgctggaggtttg
tatgccaaactttggcggatccagcaagagtag
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