Shewanella piezotolerans: swp_4126
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Entry
swp_4126 CDS
T00791
Name
(GenBank) Ribosomal small subunit pseudouridine synthase A, putative
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
swp
Shewanella piezotolerans
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
swp03009
]
swp_4126
Enzymes [BR:
swp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
swp_4126
Ribosome biogenesis [BR:
swp03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
swp_4126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF5818
Motif
Other DBs
NCBI-ProteinID:
ACJ30789
UniProt:
B8CT13
LinkDB
All DBs
Position
complement(4329479..4330165)
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AA seq
228 aa
AA seq
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MRLDKFLCKSTKLTRSAATEVLALGEVSVNGSIVTEARFQVHENNSVLWRGERLIARPSR
YIMLHKPLNTLSSNVDGDYPSLFHCIDIERAEDLHIVGRLDADTSGLVLLTDDGRWSFEI
IRPDKLCPKTYRVTLRDPIAADVAEKFNVGVQLQNESKLTAPAMLKVINEREVLLTITEG
RYHQVKRMFAAVGNRVNGLHREQIGDLQLDVVLGNWRFLSPQEVAGFL
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgcgccttgataagtttctatgtaaaagtaccaaactgacccgcagtgctgctacagaa
gtcctagcgttaggggaggtgagcgttaacggcagcattgttaccgaggcacgttttcaa
gttcatgagaataacagcgtgctctggagaggagagcggttaattgctcggccctcgcgt
tatattatgctgcacaaaccgctcaatactttaagctcaaatgttgatggtgactaccca
agtttattccattgtattgatattgaacgcgctgaagatctgcatatagtagggcgccta
gatgctgacacctctggtctagtgttgctcacagatgacggtcgttggtcatttgagatt
atcaggcctgataagctgtgccctaaaacctatcgagttactctacgtgaccctattgct
gctgatgtggctgaaaaatttaatgtgggcgttcagttacaaaacgaatctaagttgact
gctccagcaatgcttaaggtgattaatgaacgtgaggtgctgctgacgattacggaagga
cgttaccaccaagtaaagcgcatgtttgccgcagttggcaatcgcgtcaacggattacat
cgagagcaaattggtgacttacagttagatgtagtacttggaaattggcgttttctttcc
ccacaagaagtcgcgggttttctttga
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