Shewanella piezotolerans: swp_4231
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Entry
swp_4231 CDS
T00791
Name
(GenBank) Helicase, DEAD box
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
swp
Shewanella piezotolerans
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
swp03009
]
swp_4231
Enzymes [BR:
swp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
swp_4231
Ribosome biogenesis [BR:
swp03009
]
Prokaryotic type
rRNA helicases
swp_4231
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Helicase_RecD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ACJ30886
UniProt:
B8CU30
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All DBs
Position
4433155..4434387
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AA seq
410 aa
AA seq
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MPRMLFEDLQLDPCLLESLKAMGHNKPTTIQQQTIPVAMEQRDILARAPTGTGKTASFLL
PALQHIIDFPRRFGGQARVLVLTPTRELASQIHRYASHLATDLDLDISIITGGVPYAPQE
EALKKNVDILVATPGRLMEYLDKGLFNAEEVEVLVIDEADRMLDMGFSAVVETIAIESVG
RKQTMLFSATLEGSDVGRFSHQLLSNPVKLEAEAPRSEKAKIHQWVHIADDREHKFALLY
AILQQEEVERAIVFVKTREAVASLDGLLQKQGITCSFMRGDMEQKARFQALGRFTKGEVN
VLLATDVAARGIDVDDITHVINFDMPRSADTYVHRIGRTGRAGAKGTAISLVEAHDIRVV
GKIERYIEQPLKRRFIKDLRPKNKEAKPPGKKKVKDTGKTFSKKNKKKKK
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgccacgcatgctatttgaagatctccagcttgacccttgtttgttagagtcactgaaa
gcaatgggccacaacaagcccactacgatacaacaacaaacaatacctgtagcgatggag
caaagagatattcttgctcgcgcaccaacaggaacggggaaaacagcgagcttcttactg
ccagcgctgcagcatattattgactttccacgtcgcttcggcggccaagctcgagtatta
gtgctaacacctactcgtgagctggccagtcaaatccaccgctacgcatctcatttggcg
actgatttagatctggatatcagcatcatcactggcggcgtgccctacgctcctcaagaa
gaagcgttaaagaaaaacgtcgatatcttagttgccactcctggtcgcttgatggaatac
ctagataaaggcctattcaatgcagaagaggttgaagtgctcgtcatcgatgaagcagac
cgcatgctagacatgggtttttcagccgtagttgaaaccatcgcgattgaatctgttggc
cgtaaacaaaccatgttgttctctgcaacgcttgaaggcagcgacgttggtcgtttttcc
caccagctgttaagcaaccctgtgaagctagaagctgaagctccgcgtagcgaaaaggct
aagatccaccaatgggttcatattgctgatgatagagaacataaatttgccctgctatac
gctattttgcagcaagaagaagtagagcgtgcgatcgtgtttgtcaaaacacgtgaggca
gtagcaagcctagacggcctgttgcaaaagcaagggatcacttgcagctttatgcgcggt
gatatggagcagaaagctcgttttcaagcactaggccgattcaccaaaggtgaagtcaat
gtactgctagcaaccgatgttgccgcccgtggtatcgatgttgatgatatcactcatgtg
atcaacttcgatatgccacgctctgcagatacctatgttcatcgtatcggacgtaccggc
cgagcaggcgctaagggaaccgcaatatctttggtcgaagcccatgatattcgcgtggtt
ggtaagattgaacgttacatagagcaaccacttaagcgtcgcttcattaaagatcttcgc
cctaaaaacaaagaggcgaagcctccagggaagaagaaagttaaagatactggcaagaca
ttcagtaagaaaaacaagaagaaaaagaagtaa
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