Shewanella piezotolerans: swp_4312
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Entry
swp_4312 CDS
T00791
Name
(GenBank) Formate dehydrogenase, alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
swp
Shewanella piezotolerans
Pathway
swp00630
Glyoxylate and dicarboxylate metabolism
swp00680
Methane metabolism
swp01100
Metabolic pathways
swp01120
Microbial metabolism in diverse environments
swp01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
swp_4312
09102 Energy metabolism
00680 Methane metabolism
swp_4312
Enzymes [BR:
swp01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
swp_4312
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Pyr_redox_2
Fer4_20
Molybdop_Fe4S4
Pyr_redox
Molydop_binding
Pyr_redox_3
NAD_binding_8
Fer2_4
Fer4_7
DAO
Fer4
FAD_oxidored
Fer4_6
Fer4_8
HI0933_like
Fer4_9
FAD_binding_2
Amino_oxidase
Fer4_10
Thi4
FAD_binding_3
Fer4_15
Fer4_2
GIDA
NAD_binding_7
AlaDh_PNT_C
Fer4_18
Lys_Orn_oxgnase
Fer4_16
Fer4_17
Fer4_21
Znf_XAF1_N
Fer4_Nqo3
Motif
Other DBs
NCBI-ProteinID:
ACJ30963
UniProt:
B8CUA7
LinkDB
All DBs
Position
4515781..4519959
Genome browser
AA seq
1392 aa
AA seq
DB search
MKQITIDGKTLTANQQDTLLDTALNADIAIPNLCKSPAGSLVTNTKQHCDLCHVELKSAN
GELCSVRACDTKIADLDAQNIEVITQSAALSKQRKAALHNILSDHFADCEAPCQTACPAG
VDVQSYLYHIAQGDHQEAVKVIKQTLPLPLSIGRVCPAFCETECRRGLVDEPVAIRQLKR
HAADLDLEDNTPYVPPKKAATNKKVAIIGSGPAGISAGYYLSNNGHDVTIFESMPQAGGW
LRYGIPEYRLPKAILDKEIALLCENGLDIQTDTRLGRDIHLNGLIEDYDAICLAIGAQKA
VPMNYPGIELEGCYLGVDYLRDYCTEQRYRTGNKVAVIGGGNTAIDCARTAKRDGADVTL
VYRRTRDEMPAEPYEIHEAEEEGIKFHFLTNPIENHSDDNGRVSRVTFEVMALGEPDSSG
RRSPKPTGETFTEAFDTVIPAVSQTPDMEFLNHPDSQLATGEIALTRWNTFEGCEHTMSA
GLAAGLDKLFVIGDSRTGPATAVAAVADGRKASDAIEKLLTQGLTCELEKQPFNSSKAAK
TRQLETLNAQAMYPAAKHELRSKMPELDKLQRALNFSEVELGFAADDAMKEAARCLECAC
QANTDCKLRDYATEYKVKAPELDISKAQHFSIDSSAPFITFDANRCISCGACVETCKGAS
GHNAICFEKDHYQALPSTDNTAKRNAPRVGFSASMNDSDCVQCGNCVQVCPTGALVDSRD
KTQGLTSELKAPLETVSTICTYCGIGCRVEMHVDKQKNQIRRISADTESPVNGGMLCVKG
RFGFDFINSDKRLTTPLIRKEGVLTPASWPEAISLIAEKFTSIKAKHGRKSIAGLSSAKA
TNEDNYVFQKLFRSVIGNNNIDHCARLCHASTVTALRESLGSGAMTNDIPSIKDSDLIFI
IGSDTESAHPIIASHIKLALQNHGARLIVADPKKVSLADKAQLYVAQRPGTDVMLLNAIM
QQIIKNDWHDLDYIQQRVEGFSQLFDEVMSDDYSPENTALICGVSAADIIEMARLIGTAK
KTAIYYAMGITQHTSGHDNVTAISNLQLLCGNIGIKGAGINPLRGQSNVQGACDMGALPN
YFSGYQKLNDPLVQQRFRKAWGKSELCSGKGVSATEMMHGLAHGELKALYVMGENPVLSD
PDQQHVLAGLAAAEFVVVQDIFLTETAELADVVLPAAAFAEKQGHFTNTERRVQQLLPAV
TPPGEAMNDWQIVQQIAQQMGEDWQYQSEKQIWHEITEVTPQYRGITWKVIDSETANGRQ
GLQWPCPAEGHPGTPILHSKQFTHGKGKMRPVQYRLPAEMPCDDYPLMLSTGRLLEQFHT
GTLTRKTPGLNELGSPRVMISVFDAERLQINNGDQLKLSTRRGEIEIAAFVTKRAPSGGY
LSAVSLCRICRE
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagattaccattgatggcaaaaccctaactgccaatcaacaagataccttactc
gatactgcgttaaacgccgatatcgcgatccctaatttgtgtaaaagccctgcaggttct
ttagtcactaacactaaacaacattgtgacttgtgccatgttgaacttaaatcagccaat
ggcgagctctgttcagtacgcgcctgcgacactaaaatcgccgatttagatgctcagaat
attgaagtaattacccaatctgccgcgttaagtaagcagcgcaaagcagcattacacaat
atactttcagaccactttgccgattgtgaagcgccctgccaaaccgcctgccctgctggt
gttgacgtgcagtcatacctttaccatattgcccaaggcgatcatcaagaagcggtcaaa
gtcatcaagcaaacgctgcctctgccgctctctatcggccgtgtgtgcccagcattttgc
gaaacagaatgtcgtcgtggcttagtcgacgaacctgttgcgattcgccagctaaagcgt
cacgcagccgatctcgatcttgaagacaatactccatatgtgccacctaaaaaggccgcg
accaataagaaagtcgccatcataggcagtggccctgcggggatttcagcgggttattac
ctgtcgaataacggtcatgacgtcactatttttgaatccatgccccaagcaggcggttgg
ttaagatacggtatcccagagtaccgcttgccgaaagcaatcctcgacaaagagatcgca
ctgttatgtgaaaatggcttagacattcaaactgatactcgactcggcagagacatacac
ctaaatggcttaattgaagattatgacgctatttgtttagccattggcgcacaaaaagca
gtgccgatgaactaccccggtattgagctagaaggttgctatttaggcgtcgattacctc
cgagattattgcaccgaacagcgctaccgtacaggcaacaaagtagcggtcattggtggt
ggtaacacagcaatcgattgcgcccgcactgctaaacgcgatggcgccgatgtgacttta
gtttatcgccgaacccgcgatgagatgcccgcagagccttatgagatccatgaagcggaa
gaggaagggattaaatttcatttcttaaccaatcctattgagaaccacagcgacgacaat
ggccgcgttagcagagtcactttcgaagtgatggcacttggagagcctgacagctctggt
cgccgctcgccaaagccaaccggtgaaacctttactgaagcctttgatacggtgatccct
gccgtctctcaaacgcccgatatggagtttctcaaccatcctgacagtcaattagccacc
ggtgaaatagcgttaacccgctggaacacttttgaaggttgcgagcataccatgtcggca
ggtctggcagcggggctcgataaactgtttgtgattggtgactctcgtactggccctgct
acagcggttgcagctgtagctgatggcaggaaggcctccgacgcgattgagaaactgctg
acccaagggctgacttgcgaacttgaaaagcaaccctttaactccagcaaagcggctaaa
actcgccaacttgaaacactcaacgcgcaagctatgtatccagcagccaagcatgaacta
cgcagtaaaatgccggagctcgacaagttgcagcgagccctcaattttagcgaagtcgag
ctaggttttgccgccgatgacgccatgaaagaagctgcgcgctgccttgagtgtgcttgc
caagccaataccgactgtaaactgcgcgactatgccactgagtacaaagtcaaagccccg
gagctggatatcagtaaagcacagcactttagcatcgacagtagcgcaccgtttattaca
ttcgacgcaaaccgctgtattagctgtggcgcctgcgtagaaacctgcaaaggggctagc
ggccataacgcaatttgctttgagaaagatcactaccaagcgctaccctcgactgataac
acagccaaacgtaatgcgccaagagtcggctttagcgccagcatgaacgacagtgattgc
gtgcaatgtggaaactgcgtgcaagtgtgtccaactggcgcgctggttgactcgcgtgat
aaaacccaggggctaacctccgagctaaaagcaccacttgaaacagtgtcgactatttgc
acctattgcggtattggttgccgagtagagatgcatgttgataaacagaagaatcaaatc
cgccgtataagtgcagatacagaatcccccgtcaacggcggcatgctgtgtgttaaagga
cgttttggtttcgactttatcaacagcgataaacggcttactacgccgttaattcgcaaa
gaaggagtgctcacgcctgccagttggccagaagctatcagcttaattgcagagaagttc
actagcattaaagctaagcatggacgtaaatcgatagcgggactttcgtcggcgaaggcg
actaacgaagacaactatgtatttcaaaagttgttccgcagcgtcattggcaataacaac
atcgaccattgtgcacggctctgccatgcttcaaccgttaccgccctgcgcgaaagctta
ggcagtggtgccatgaccaacgatattcctagcattaaagattctgatctaatttttatt
attggctcggatactgaaagtgcgcatccaatcattgcctcacatattaaactggcgcta
caaaatcatggcgcacgcttaatcgttgccgatccgaaaaaggtttctcttgccgacaaa
gcccagctttatgttgcgcaaagacctggcacagatgtgatgctattgaatgcaataatg
cagcagatcatcaaaaacgactggcacgatttagattatattcaacagcgtgttgaaggt
ttcagtcagcttttcgatgaagtgatgagtgacgactatagccctgaaaatactgcttta
atctgcggtgttagcgcggcagatatcatagaaatggcgcgattaattggcaccgctaaa
aagactgctatttactatgcaatggggatcactcagcacacctcaggccatgataatgtc
accgctatctctaacttacagttactgtgtggcaatattggcattaagggcgctggtata
aacccattgcgcggccaaagtaatgttcaaggtgcgtgtgacatgggcgcactgccaaac
tacttcagcggttaccaaaagctcaatgatccgctagttcagcaacgctttagaaaggct
tggggtaagagtgagctgtgctccggtaaaggtgtatcagccacggagatgatgcatggg
ctagcccatggcgaactcaaagccttatatgtaatgggtgaaaatcccgtgttgagcgac
ccagatcaacagcatgttctcgcaggcctcgcagcagcagagtttgtggtagtacaagat
atcttcttaaccgaaaccgcagaattggccgatgtcgtcttgccagctgcagcctttgca
gagaaacaggggcactttaccaatactgagcgccgcgtacagcagcttctacccgcagtt
acgccgccgggtgaagcgatgaatgactggcagatagtgcagcaaatagcgcagcagatg
ggtgaagattggcaataccagtcagaaaagcaaatttggcatgagatcaccgaagtgacc
ccacaataccgaggtattacgtggaaagtcatcgacagtgaaaccgccaatggccgacag
ggtttgcagtggccgtgcccggcagaaggccacccaggcacgccaatactacacagtaaa
cagtttactcacggcaaaggaaaaatgcgccctgtgcagtatcgcttgccggcagagatg
ccttgtgatgactatccactgatgctgtctaccggacgcttattggagcagttccacaca
ggcaccctcacccgtaaaaccccggggcttaatgagctaggctcaccgcgagtaatgatc
tcagtattcgatgccgagcgattgcagataaacaacggcgatcagcttaagttatctacc
cgccgcggtgagatcgagattgcagcttttgtgactaagcgcgccccaagcgggggttat
ctttctgccgtttcactttgcagaatctgccgcgaataa
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