Shewanella piezotolerans: swp_4360
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Entry
swp_4360 CDS
T00791
Name
(GenBank) SMC family protein, putative
Organism
swp
Shewanella piezotolerans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3584
Mvb12
Motif
Other DBs
NCBI-ProteinID:
ACJ31006
UniProt:
B8CT97
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All DBs
Position
complement(4566811..4570485)
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AA seq
1224 aa
AA seq
DB search
MPSLNRIVLIDTHLPGVVELALDGHTNICGTNASGKTTLQRLVPVFYGEYPSRVVPSTRD
SFERWYLPHESSFIIYEYIKSDGLAYQAVLASAGDGKGVNYRFIGKGFELDDYIKTQQGD
NIQCFTMAELGREMKRAGIAVTNLLNTREFRAIIQNDRALLSTGSNRTELRNYARQFSLC
EAEHSLRHIEKLAKAVHSKEGKMETIKSMIAAILEEDGVNPPSSRINPQHVESWIKESQL
IQGFELIRPEFEKLEQEFDQLLSTEQRLASLRRGYSKDESDEVERQERHQDLSKALNAKL
RELDEEWKEQRDELNLDLSAAKGDVAKCEQELDSIEDQHASFQDAEIEQAKLDLEQLPSW
RGSLENLSERHKLQTEKHQDIEAAYNARRSKIGEGLNRELENLHQEQDSLRESRDKQREQ
GRSELAALEEQWRDATDKGQAKFSEQAYQLKLSAAELKVRVDSVTYSEEEKLALAVFDER
ITRADEEQESCNAKVDRFTSEERKLRAKRDQANEGLRVAGIRVTERQSELEELHHILFPQ
SHTLLEFLRKEANGWENTLGKVINSDLLHRSDLHPTISGENLEALYGIALDLKAIDSPEY
AASEQELRIKHANADEMLTSAKELQTEAEAKLVAVNSELDAMARELTFARTAYKNSRDDL
RRLFDDKRAEQEKINQALNERKSASQKQLARLDNELKQLKQQQQEWLEEQKEQALEARME
KNAYWQEVVGALDNQLGQVKANIQHRRDHAKSEQKACEQWYKNELKSRGIDEAKIVALKT
EIRTLEANISKAEQRRSEVLRYDDWYQHTWLKRKPKLQTELSTVKQASLSLEQQLKAKSN
EVKAKRSELDGERKRSDAVQVEASENLTKLRSVMRKLTELKLPANNEDAQGGLSERLRQG
EDQLLKRDSLLGSVKQYVEHFDSVIASKSGSSLSETWERAREESSFINDKGIRILDYRKL
VPQLEQLLNVMVPQAMKGLRDQGQIFGIDLTAFYDVLADIDRRIATQSARITREVGEELF
LDGVSESAVKIRSRISELEFWPELEAFVKAYRQWKADGFSELPGEDYTNSMRRALDIIGR
AALSGGIAKLLEIELRLKEGNSDLIIRTDRQLNESSSHGMAYLILCKFLLAFTRLLRGRA
EVTIHWPIDELGTLHHGNVKKIFDACENNNISVLGAFPNPESEVLSLFANRYIINKQTKK
LQVVKPQINPIAEKLSQRRTQEAV
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgccaagcttaaatcgcatcgtactgattgatactcacttgccaggcgtggtcgaactc
gcccttgatggccataccaacatatgcggcacgaacgcatcgggtaaaaccacgctacaa
cgtttggtaccggttttttacggtgagtacccaagccgagttgtcccctctacacgtgat
agttttgagcgctggtacctgccgcacgaatcaagctttatcatctatgaatatatcaag
tctgacggactcgcttatcaagcggtattagcctctgcaggcgacggcaaaggggttaat
taccgctttatcggtaaaggttttgagttagatgattatattaaaactcagcagggcgat
aacattcagtgttttaccatggctgaacttggccgtgagatgaagcgagcgggtattgcg
gtcacgaacttactcaatactcgagagtttagggcgatcattcagaacgatagagcatta
ttgagcactggtagtaaccgtaccgagttacgtaattacgcccgtcaattctcactctgt
gaagctgagcattcgctacgccatattgaaaagctagctaaagcggtgcactcaaaagag
ggcaagatggagacgatcaaatcgatgatcgccgctattcttgaggaggatggcgtaaat
ccaccgagctcgcgtattaacccacaacatgttgagtcttggatcaaagaaagccaactt
attcaaggttttgagcttatccgtccagagtttgaaaagcttgagcaggagtttgaccag
ctactaagcacagagcagcgactcgccagcctgcgccgcggttatagcaaagatgaaagt
gatgaagttgaaaggcaagagcgtcaccaagatctatctaaagcgctcaacgccaagcta
agagagctagatgaagagtggaaagagcagcgtgacgagctcaaccttgacctttctgcc
gcgaaaggcgatgtggccaagtgtgaacaagagttagattctattgaagatcaacatgct
tcttttcaagatgcagagattgaacaagcaaaattggatctagagcagctaccaagctgg
cgtggtagcttagaaaacttgtcagagcgacataagttacaaactgaaaagcaccaagat
attgaagcggcttacaacgcacgccgcagtaaaattggtgaagggcttaaccgagagctg
gaaaatttgcatcaagagcaagacagcttaagagagtctcgcgataaacagcgtgaacaa
ggccgcagtgaattagcagcattagaagagcaatggcgtgacgcgaccgataaaggtcag
gctaaatttagtgaacaggcctatcaattaaagctgtctgccgcagagctaaaagtacgc
gttgatagcgtgacctattcggaagaggaaaagcttgccttagcagtatttgatgaacga
attacccgcgccgatgaggagcaagaaagctgcaatgctaaggttgatcgcttcacaagt
gaagagcgaaaactgcgggctaaacgtgatcaagctaacgaaggtttgcgggtggctggc
atacgcgtcactgagcgccaaagcgagcttgaagagctgcaccatatcttattcccacag
tcacacacgttactagagttcttgcgtaaagaggccaatggttgggagaacaccttaggc
aaggtgatcaattcagatctactacaccgcagtgacttgcacccgactattagcggtgaa
aaccttgaagctttatatggcatagcgcttgatctaaaagctatcgattcaccagagtac
gctgcatctgagcaggagctgcgcatcaagcatgctaacgcggatgagatgttaaccagt
gcgaaagagttacaaactgaagcagaagctaaattggtggccgttaattcagagcttgat
gcgatggcaagagagctaacatttgcccgcacagcatacaaaaatagccgcgatgatctg
cgccgtctgtttgatgataaacgcgctgagcaggagaagatcaaccaagcacttaatgag
cgaaagtctgcctcgcaaaagcagcttgccaggctcgataacgagctgaaacaattaaag
caacagcagcaagagtggcttgaagagcaaaaagagcaggcgttagaagcgcgaatggag
aaaaacgcttattggcaagaggttgttggtgcattagacaatcaacttggtcaggttaaa
gcgaatatacagcaccgccgagatcacgccaaaagtgaacaaaaggcgtgtgaacagtgg
tacaagaatgagcttaaatctcgtggtatcgatgaagccaaaattgttgcgctaaaaaca
gagatccgcacccttgaagcgaatatcagtaaagcggaacaacgccgcagtgaagtgctg
cgttatgacgactggtatcaacatacttggcttaagcgtaagcctaagctacaaactgag
cttagcactgttaagcaagctagcttatcgttagagcagcagcttaaagccaaatctaat
gaggtcaaagccaagcgtagtgagcttgacggtgaacgcaagcgctctgatgctgtgcaa
gtagaagcatcggaaaacctcactaaattgcgcagtgttatgcgcaaactcaccgagctt
aaactgcctgctaataatgaggatgctcaaggtggactcagcgaacgtctgcgccaaggt
gaagaccagctgttaaagcgtgattcattactcggctctgttaagcagtatgttgaacac
tttgactcggtgattgccagtaagtcaggttctagtctgtcagagacctgggagcgtgcg
cgcgaagagtcgagctttatcaatgataaaggcattcgtattctagattaccgcaaatta
gtgccgcagttggaacagctactgaacgtgatggtgccacaggcaatgaagggtctacga
gatcaggggcaaatattcggtattgatctcactgcattttatgatgtactggccgatatt
gaccgccgtattgccacccaaagcgcccgtattacccgtgaggtgggtgaagagttgttc
cttgatggggtatcggaatctgcggttaaaatccgctcacgcattagcgaactagagttt
tggccagaacttgaagcctttgtaaaagcctatcgccaatggaaagccgatggcttcagt
gaattgccgggtgaggattacaccaacagcatgcgccgcgcattagatattatcggtcgg
gcagcattatcgggcggcattgctaagttactggagattgaactgcgcttaaaagagggc
aatagcgacctgataatacgtaccgacagacagcttaatgagtcatcaagccatggtatg
gcgtatctgatcttatgtaagttcttgttggcatttacccgtctactgcgtggccgggcg
gaggtgaccattcattggcctatcgatgagctcggcaccttgcatcacggtaacgtgaaa
aagatttttgatgcttgtgaaaacaataatatctcagtgttgggtgcattcccgaatcca
gaatctgaggtgcttagcctgtttgctaatcgttatattattaacaagcaaaccaaaaaa
ctgcaggtggttaaaccacaaattaatccaatagccgaaaaacttagtcagcgacgtacc
caggaggcggtgtaa
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