Shewanella piezotolerans: swp_4379
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Entry
swp_4379 CDS
T00791
Name
(GenBank) Peptidoglycan glycosyltransferase
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
swp
Shewanella piezotolerans
Pathway
swp00550
Peptidoglycan biosynthesis
swp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
swp_4379
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
swp01003
]
swp_4379
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
swp01011
]
swp_4379
Enzymes [BR:
swp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
swp_4379
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
swp_4379
Glycosyltransferases [BR:
swp01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
swp_4379
Peptidoglycan biosynthesis and degradation proteins [BR:
swp01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
swp_4379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
ACJ31024
UniProt:
B8CTB5
LinkDB
All DBs
Position
complement(4586905..4589271)
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AA seq
788 aa
AA seq
DB search
MTDKATPKPKKTTKRPAVKRVSAGKGGKKRATKKSPQKSGWGRKIWSITWKLGVIAAVVI
AAYGIYLDQIIARKFEGQKWHLPAQVFSRSMALYPGAAVSHGQLMSELKLLGYRKVANPR
QVGEFSASKTKIDLWRRPFLHPKGDQTEQRVMITFDSNGISSVARSSDQRQLAVFHLEPV
LLDRIITGDGEDRLFVAADKMPQAIIDALILVEDRSFYEHHGVNPFAILRAAMVNISAGR
TVQGGSTLTQQLAKNFFLSSERSLTRKLREALMAIIIDFRYEKNEILEAYLNEVYMGQDK
ARGVHGMGLASQFYFGRPIGELTLPQQAFLVAVIKGPSYYNPWRYEERAQKRRDLVLRLL
MEAGELNVAQYEAAVESPLGLRKSDKPVHQKLPAFFAVVKRELSTRYGEALLQQSGIKVY
TTLDPMAQEAAEKAVKQTLKQLGKNDESLQVGMVLTDKYSAGIAAMVGDKVPSYQGFNRA
VEIRRPIGSLIKPFVYATALNQPKKYTLATPLKDEPITLKNGQGKTWSPQNVDRKFRGQV
PLLTAFKKSMNVPTVNLGMAIGVSSVATTLDKAGWKDKVPEYPSMLLGAVNGSPLMVAQV
FQTVADNGRYRHLNSVTTVLDENNQPLVASKRAATQAIPVASNYLVKYAMTQVVDNGTAK
RLGNAFPRATLAGKTGTSNDSRDSWFAGFDERNVAAIWVGRDDNGKTGLYGSSGAMAVYQ
AFLKNRPPLSLRMAPVDGTVQGYFDRNSGAAKQADCGNVIKVPALRESYQPVANCGEPLP
WWKKLIGG
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgactgataaagcgacaccaaaacctaaaaaaaccaccaagcgtccagcggtaaaaaga
gtatcagccggcaaaggtggtaaaaaaagagccactaagaaatctccccaaaaatcgggt
tggggccgtaaaatatggtctataacttggaagcttggcgttattgcagcagtcgttatt
gctgcttatgggatctatttggatcaaattatcgcacgcaagtttgaagggcaaaaatgg
catttacctgcgcaagtgtttagccgctctatggcactatatcctggagcagctgttagc
cacgggcagttgatgtctgagctaaaactactgggctatcgtaaagtggctaacccgcgc
caagtgggagagttctctgcttcaaaaacaaaaattgatctatggcgtagacctttccta
catcctaaaggtgaccaaacagaacaaagagtgatgataacgtttgactcgaacggcata
agctctgtggcaagaagtagcgaccaacgccagctggcggtatttcatttagaaccggta
ctactggacagaattattaccggggatggagaagatagattatttgtggcagccgataag
atgccacaagcgataattgatgcgcttatcttggttgaagatcgcagcttctacgaacat
cacggtgttaatccttttgccatcttgcgcgcggccatggtgaatatcagtgctggtcgg
acagtgcagggtggttcaactttgacccaacaactcgctaagaacttcttcctttcaagt
gaacgttcactgacgcgtaagctgcgtgaagccttaatggcgattattatcgattttcgt
tatgagaaaaacgagatcctagaagcttacttaaatgaagtctacatggggcaagacaaa
gcgcggggggttcatggcatgggactcgcctcacaattctattttggccgaccaataggc
gagctaaccttgcctcaacaagcattcttagtcgcggtgattaaggggccttcctattac
aacccttggcgatatgaagagcgagcacagaaacgtcgtgatttagtgcttaggttactg
atggaagcgggagagctgaatgtggctcaatatgaagctgcagttgaatcaccattagga
ctaagaaagtccgataaaccagtacaccaaaaactgccagcgtttttcgctgtggttaag
cgtgaattgtcgactcgatatggtgaggcattattgcaacagtcaggcattaaggtctat
accacacttgaccctatggcgcaggaggcggctgagaaagcggtgaaacagacccttaag
cagctaggtaagaatgatgaatccttgcaagttggcatggtgctgaccgataaatactca
gcgggtattgccgcaatggtcggtgataaggtaccaagttatcaaggctttaatcgtgca
gttgagataaggcgacctataggttcgttaatcaaaccatttgtatatgccacagcgctt
aatcaaccgaagaagtacaccttagcaacgcctttaaaggatgaacctatcacccttaaa
aatggccaaggtaaaacctggtcaccgcaaaacgtagatagaaaatttcgtggccaagtg
ccgctattgactgcgtttaaaaagtcgatgaacgtgccgaccgttaacttaggaatggca
attggtgtcagcagtgtggcaacgaccttagacaaagcgggttggaaagataaggtccct
gagtacccatcaatgctactaggcgcggttaatggctcaccactcatggtggcgcaggtg
ttccagaccgttgcagataatggtcgttatcgccatttaaactcggttaccacggtgcta
gatgagaataatcaaccgttagtcgcatctaagcgggcagcgacgcaagcgattcctgtt
gcaagcaattacctggtcaaatatgccatgacacaagtggtcgacaatggcaccgctaaa
cgcttgggtaatgctttccctcgagcgacacttgcggggaaaacaggtaccagtaatgat
tcacgtgattcatggtttgctggttttgatgagcgaaacgtagcggctatctgggttggc
cgtgacgataacggtaaaacaggcctctacggtagcagtggcgcgatggcagtctatcaa
gcgtttttgaaaaatcgtcctccgctgagtctgcgtatggcgcctgttgatggtacggtt
caaggttattttgatcgtaatagcggcgcggcgaaacaagctgactgcggcaatgtgatc
aaggttcctgctttaagggaaagctatcagccggtggctaattgtggtgagccgctaccg
tggtggaaaaagttgattggcggctag
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