Shewanella piezotolerans: swp_4580
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Entry
swp_4580 CDS
T00791
Name
(GenBank) Toxin secretion ABC transporter protein, HlyB family
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
swp
Shewanella piezotolerans
Pathway
swp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
swp_4580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swp02000
]
swp_4580
02044 Secretion system [BR:
swp02044
]
swp_4580
Transporters [BR:
swp02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
swp_4580
Secretion system [BR:
swp02044
]
Type I secretion system
Adhesin protein transporter
swp_4580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
SMC_N
Motif
Other DBs
NCBI-ProteinID:
ACJ31220
UniProt:
B8CUM8
LinkDB
All DBs
Position
4800425..4802083
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AA seq
552 aa
AA seq
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MRENFSLLNNNRAKAELLLSSTFINLLSLALPFTMLQIYDRILPNQGYGTASVLASAVAV
AILLELLLRYSRSWLLASSAANFELQTTTKVVNALMQSDYHHVESLGTGKVSNGLASIAA
MRELYSGQALVALMDFPFVLIFLALVAYIGGPLVFIPIAVWLVIGGLVFFIGQKLNRATQ
DLALTESERSRMLILVLSGLTTAKALAMETRLSASYSEINYRRLAQQQQVDWLSSKLQEL
IQGASQGTTLLIVLIGCFEVLNGDLTTGGLAACSILAGRAIAPLSAIISLRSRLASANTA
MNHVNDLAKLPQEMFKGTTQYQQKLPLGPIKFDDVACSQVGAKLNHFDLSIPSGSLVTVT
SDPLTHASLLLSVVGAFHHLEQGSITIAGVAQNEHKADEYRQSVTYVSPWPTLFAGSLLE
NMTMFRPELESQAMEVAEALGLTSSIAQLPAGYQTEVGVNDSQMLNKGAIKLIALVRAFV
QAPSILLLDEPMISLDADSQTRLINVINRYSGNMTIICASHFAELATNSDLRVNIGASGE
CNIITATQEAEA
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaaacttcagtttactaaataataatcgcgctaaagctgagttgttgctctcc
tcgactttcattaatttattatctctggcgctgccatttactatgttgcaaatttacgac
cggatcctaccgaatcaaggttatggcaccgccagcgtgctagcttcagcggtggcggtg
gctattctactcgaactattattgcgctactctcgcagctggttattggcctcatctgct
gccaattttgagctacaaaccaccaccaaagttgtcaatgctttaatgcaatctgactac
caccatgtagaaagcctcggtaccggcaaagtatcaaacgggcttgctagcatagccgct
atgcgagagctctattctgggcaagcactcgttgcgttaatggatttcccttttgtgctg
atttttctagccttagtcgcttatattggtggcccgttagtgttcattcctatcgcagtc
tggcttgtgatcggaggcttagtattttttatcggtcaaaagctaaaccgtgctacacaa
gatttggcactcactgagagtgaacgttcacgcatgctgatcttggtattgtcaggatta
acaacagctaaggccttggcaatggagacccgcttgtcggctagctacagcgaaattaat
taccgccgtttagcgcagcagcaacaagtagattggttatcttcaaaattacaggagttg
atccaaggtgcatctcaaggcaccacactattgattgtactaatcgggtgctttgaagtg
ttaaacggtgatcttacaactggtggcttagcggcctgctctatattagctggcagagca
attgctcccctcagtgccattattagtctgcgctcgcgactcgcaagtgctaataccgca
atgaatcacgttaatgatttggccaaattgccacaagagatgtttaaaggcacgactcaa
tatcaacagaaactgccgctaggtccaattaagttcgacgatgtagcctgttcacaagtt
ggtgctaagctcaatcattttgatctatctatccccagtggcagtttagtcacagtgact
tccgacccactcacccatgcgagcttacttctaagcgtcgtcggcgccttccaccatttg
gagcaaggtagtatcaccattgcaggagttgcacaaaacgaacataaggctgatgagtac
cgacaatcggtcacctatgtctctccttggccaaccttgtttgcaggtagcttactggaa
aacatgaccatgtttaggcctgagctagaatcacaagcgatggaggtagctgaagcatta
gggctaaccagcagcattgcccaacttcccgcaggctatcaaaccgaagtgggtgtaaac
gacagtcaaatgctcaacaaaggcgcaataaaactcattgccttagtaagggcgtttgtg
caagcaccatcaatcttgctgctcgatgagccgatgatttcacttgatgctgattcgcag
acgaggctaatcaatgtcattaaccgctacagtggcaatatgaccattatttgcgcctcc
cattttgctgagctagcgactaatagcgacctaagagtgaatattggcgcctctggtgaa
tgcaacattatcactgcgactcaggaggctgaagcatga
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