Shewanella piezotolerans: swp_4694
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Entry
swp_4694 CDS
T00791
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
swp
Shewanella piezotolerans
Pathway
swp03420
Nucleotide excision repair
swp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
swp_4694
03430 Mismatch repair
swp_4694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
swp03400
]
swp_4694
Enzymes [BR:
swp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
swp_4694
DNA repair and recombination proteins [BR:
swp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
swp_4694
MMR (mismatch excision repair)
Other MMR factors
swp_4694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
ACJ31330
UniProt:
B8CTT6
LinkDB
All DBs
Position
complement(4924240..4926405)
Genome browser
AA seq
721 aa
AA seq
DB search
MDVSSLLDGLNDKQREAVGAPQSSMLVLAGAGSGKTRVLTHRIAWLMQVEQQSPYAILAV
TFTNKAAKEMRERVEKVAGGNMSRMWIGTFHGLAHRLLRTHYKEANLPQSFQILDSDDQL
RLIKRILKSLNLDEKQYPPRHAQGYINGKKDLGLRPSHIDAGGFPIEQNLLKIYQVYQDS
CDRAGLVDFAEILLRAHELWLNKPHILDHYQDRFKHILVDEFQDTNAIQYAWIRVLAGSS
ANVMIVGDDDQSIYGWRGAQVENLHKFLGDFPTAQTIRLEQNYRSSANILNASNELIANN
PDRMGKKLWTDDKDGEPIGLYCAFNEMDEARFIVGRINDWQDEGGKLADCAILYRSNAQS
RVLEEALLHKGIAYRIYGGLRFFERQEIKDAMGYLRLISNKNDDAAFERVVNTPARGIGG
RTLEIMRTTARQQELTLWDACVRLLEEKVLSGRAANAVRGFMDLIVALRVDTEEQSLHRR
TDHVIQASGLKLMYETEKGEKARARVENLEELVTAARSFVVPEELEDMGELDAFLSHAAL
EAGEGQADEFTDAVQLMTLHSAKGLEFPMVFMAGVEEGLFPSQMAIDEGDRLDEERRLCY
VGMTRAMQQLYITYAESRRIYGRESFARPSRFVKEIPEQFVQEIRMRTQVSAPAVSTRFS
KQDSSFNESGFKIGQKVSHPKFGEGTVTNYEGSGPQARIQVNFYDVGSKWLVIAYARLEK
L
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatcttctttactagacggcctaaatgacaagcagcgtgaagccgtaggcgcg
ccgcaatctagcatgttagtgttggctggagcgggtagtggtaaaactcgagtgttaaca
caccgaatcgcttggctaatgcaggtcgaacagcaaagtccttacgctattttagcggta
acgtttaccaataaagcagctaaagagatgcgtgagcgcgtcgaaaaagtcgctggtggt
aatatgagccgcatgtggattggtaccttccacggtttagctcaccgattactgcgcacc
cattataaagaggccaacctgccgcaaagcttccaaattttagattccgatgatcaacta
cgactgatcaaacgcattctaaaaagcctaaatttggatgagaaacagtatccaccaagg
catgctcaaggctatatcaatggtaaaaaagatcttggtcttcgtccatcgcatatcgat
gcgggcggctttcctattgagcaaaacttactgaaaatctatcaggtttaccaggattct
tgtgaccgcgcaggtctggtcgattttgctgaaatattactgcgcgctcatgagctgtgg
ctcaataaaccgcatattctcgatcactaccaagacagatttaaacatattttggtcgac
gagtttcaagacaccaacgccattcaatatgcttggatccgtgtgctcgcgggctcgagc
gctaacgtgatgatagtgggtgatgatgaccaatcaatttatggctggcgtggcgctcaa
gttgaaaacctgcataagttcttaggggattttcctacagctcagactattcgcttagag
cagaactaccgctctagcgccaatattcttaacgcctctaacgaactgatcgctaacaac
cctgatcgcatgggtaaaaagctttggaccgatgacaaagatggtgagccgatagggctt
tattgtgcctttaatgaaatggatgaagcgcgctttattgtggggcggattaacgattgg
caggatgaaggtggcaagttagcagattgcgccattttatatcgctcaaatgcgcaatca
cgcgtgttagaagaagccttgctgcacaagggaatcgcttaccgcatctatggcggtcta
cgattcttcgagcgccaagagattaaagacgccatgggttacctgaggctcattagcaat
aaaaatgatgatgccgcctttgagcgtgtcgtgaatacacctgcgcgcggtattggcggt
agaaccttagagataatgcgtactacagcacgtcagcaagagcttaccctgtgggatgct
tgtgtgcgtttgctagaggaaaaagtacttagcggccgtgcagccaatgccgttcgtggt
tttatggacttaatcgtcgcgctaagagtagacactgaagagcaatcgttacacagacgc
accgaccatgtgatccaagcgtctggccttaaactgatgtatgaaactgaaaagggcgaa
aaggccagggcacgcgttgaaaacttggaggagctggtcactgcagcgcgcagctttgtt
gtgcctgaagagcttgaagatatgggcgagcttgacgctttcctatctcacgcagcatta
gaggctggtgaaggccaagccgacgagtttaccgatgcggtgcagttgatgacattgcac
tcagccaaaggtcttgaattccctatggtattcatggcgggcgttgaagagggtttgttc
cccagccagatggcaatcgatgaaggtgaccgcctcgatgaagagcgacgtctttgttat
gtggggatgacccgagcgatgcaacagctctatataacctatgccgagtctcgccgcata
tatggccgagagagctttgctagaccgtcacgttttgtgaaagagatccctgagcaattt
gtacaagagatccgcatgcgtacccaagtgtcagcgccggcagtaagtacacgttttagc
aaacaggacagctcttttaacgagtctggtttcaaaataggccaaaaagtgagtcatccc
aaatttggtgaaggtactgttaccaattacgaaggcagtggcccacaggcgcgaattcag
gtcaatttttatgatgttggcagtaagtggttagtgattgcttatgctcggctagagaag
ctataa
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