Shewanella piezotolerans: swp_4799
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Entry
swp_4799 CDS
T00791
Name
(GenBank) RNA polymerase sigma-32 factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
swp
Shewanella piezotolerans
Brite
KEGG Orthology (KO) [BR:
swp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
swp03021
]
swp_4799
Transcription machinery [BR:
swp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
swp_4799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
Fe_dep_repress
GntR
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
ACJ31426
UniProt:
B8CUV0
LinkDB
All DBs
Position
complement(5025816..5026673)
Genome browser
AA seq
285 aa
AA seq
DB search
MTDQTQTMALMVPQSSGSLESYIHSAHSISMLDAEKEHELAKRLQETGDLSAAKELIMSH
LRFVVHVAKGYSGYGLPQADLIQEGNIGLMKAVKRFDPDVGVRLVSFAVHWIKAEIHEYV
LKNWRIVKVATTKAQRKLFFNLRKTKKRLGWFSDNEVGMVAESLGVSKADVTEMESRMAA
QDPAFDLASDNDDEQDYAPMHYLEDHSSDLASQVENDNWEQSNQTRLLSAIKTLDERSQH
ILQARWLNEDKTTLQELAATYQVSAERIRQLEKNAMNKLKGRMEG
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcaaacgcaaacaatggcactaatggttcctcaaagtagtggaagcctcgag
tcttatattcactcagcgcacagcatctctatgctggatgcggagaaagagcatgagcta
gcgaagcgtctacaggaaactggtgacctaagtgctgcgaaagagctgattatgtcgcat
ctgcgctttgttgtgcatgttgccaaaggctactctggttacggtctaccgcaagccgat
ttgattcaagaaggtaatattggcttgatgaaagccgttaagcgttttgacccagatgtg
ggcgtacgcttggtatcatttgccgtgcattggatcaaagctgaaattcatgaatatgtg
cttaaaaactggcgcatagttaaggttgcaaccactaaagcccagcgtaagttgttcttt
aaccttcgtaaaactaaaaagcgtctcggctggtttagtgataacgaagtgggcatggta
gctgaaagcctaggtgtttctaaagctgacgtgaccgaaatggaatcacgtatggctgca
caagatcctgcttttgatttagctagcgataacgatgatgagcaagattatgcgcctatg
cattaccttgaagatcattcatctgacttagcttctcaagttgaaaatgacaactgggaa
caaagtaatcaaacgcgtctgctgtcagctatcaagactcttgatgaacgtagtcagcat
attctccaagctcgctggttaaacgaagataaaaccacgctacaagagctagcagcaacc
tatcaagtatcggcagagcgtattcgccaacttgaaaaaaatgcgatgaataaattgaaa
ggacgaatggaaggctaa
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